RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CACNA2D3Q8IZS8 1091 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 KCTD6Q8NC69 237 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 CXorf38Q8TB03 319 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 HSPH1Q92598 858 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 ARHGEF2Q92974 986 aaKnown RBP10.96□□□□□ -0.65
CPNE1-218ENST00000439806 CHMP6Q96FZ7 201 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 C9orf72Q96LT7 481 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 PWWP2AQ96N64 755 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 DNAI2Q9GZS0 605 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 PLEKHA5Q9HAU0 1116 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 SETD4Q9NVD3 440 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 PCSK1NQ9UHG2 260 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 GGA2Q9UJY4 613 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 GINS2Q9Y248 185 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 C5orf60A6NFR6 353 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 C3orf70A6NLC5 250 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ANKRD65E5RJM6 399 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TRIM66O15016 1216 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 DYNC1LI2O43237 492 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TCEA3O75764 348 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TRUB2O95900 331 aaKnown RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 IFNB1P01574 187 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ABHD2P08910 425 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ZSCAN5DPP0CG00 497 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SETSIPP0DME0 302 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SMIM10L2AP0DMW4 78 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SMIM10L2BP0DMW5 78 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 CYP2C9P11712 490 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ETS1P14921 441 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 MIPP30301 263 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SNX16P57768 344 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TMEM62Q0P6H9 643 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 OASLQ15646 514 aaKnown RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 KIZQ2M2Z5 673 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TNFAIP8L3Q5GJ75 292 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 MARCH8Q5T0T0 291 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 RNF187Q5TA31 235 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 CYP4F22Q6NT55 531 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 NOTUMQ6P988 496 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SLC27A1Q6PCB7 646 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 LCLAT1Q6UWP7 414 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 FAM183BPQ6ZVS7 135 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 CENPUQ71F23 418 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SLC35B2Q8TB61 432 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ACTL9Q8TC94 416 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 DYDC1Q8WWB3 177 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 ATXN2LQ8WWM7 1075 aaKnown RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SNX27Q96L92 541 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.666e-9■■■□□ 15.1
CPNE1-218ENST00000439806 MAK16Q9BXY0 300 aaKnown RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TRIM6Q9C030 488 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SNTG2Q9NY99 539 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 SHOC2Q9UQ13 582 aa10.95□□□□□ -0.66
CPNE1-218ENST00000439806 NRCAMQ92823 1304 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 SMIM35A0A1B0GVV1 85 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 MCF2LO15068 1137 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 XPOTO43592 962 aaKnown RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 DRD4P21917 467 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 IL1R2P27930 398 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 AXLP30530 894 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 PCK1P35558 622 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 RGS7P49802 495 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 EIF3EP60228 445 aaKnown RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 KRT81Q14533 505 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 MFSD10Q14728 455 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 PCBP1Q15365 356 aaKnown RBP eCLIP10.94□□□□□ -0.662e-19■□□□□ 8.2
CPNE1-218ENST00000439806 QPCTQ16769 361 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 KCNT1Q5JUK3 1230 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 GKAP1Q5VSY0 366 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 CCDC121Q6ZUS5 278 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 EXOC3L1Q86VI1 746 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 CCDC13Q8IYE1 715 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 ARFGAP1Q8N6T3 406 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 GLIS1Q8NBF1 620 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 RXFP2Q8WXD0 754 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 PPM1EQ8WY54 764 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 OSMRQ99650 979 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 MRPL45Q9BRJ2 306 aaKnown RBP10.94□□□□□ -0.66
CPNE1-218ENST00000439806 CNPY3Q9BT09 278 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 APOL6Q9BWW8 343 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 CALN1Q9BXU9 219 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 ADAM7Q9H2U9 754 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 ADAMTS10Q9H324 1103 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 VPS37BQ9H9H4 285 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 RSAD1Q9HA92 442 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 KCNK9Q9NPC2 374 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 LGALS13Q9UHV8 139 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 USP18Q9UMW8 372 aa10.94□□□□□ -0.66
CPNE1-218ENST00000439806 UBQLN1Q9UMX0 589 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms