RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 B3GALNT2Q8NCR0 500 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 PRSS33Q8NF86 280 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 CSGALNACT1Q8TDX6 532 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
RFFL-204ENST00000414419 DHTKD1Q96HY7 919 aaPredicted RBP11.94□□□□□ -0.5
RFFL-204ENST00000414419 SPATA17Q96L03 361 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 MYRFLQ96LU7 910 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 CEP295NLQ96MC4 621 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 MED10Q9BTT4 135 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 ELOVL4Q9GZR5 314 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 DPEP3Q9H4B8 488 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 TMEM8AQ9HCN3 771 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 THG1LQ9NWX6 298 aaKnown RBP11.94□□□□□ -0.5
RFFL-204ENST00000414419 OBP2AQ9NY56 170 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 MRPS17Q9Y2R5 130 aaKnown RBP11.94□□□□□ -0.5
RFFL-204ENST00000414419 WDFY4Q6ZS81 3184 aa11.94□□□□□ -0.5
RFFL-204ENST00000414419 F5P12259 2224 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 BICDL2A1A5D9 508 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 CHADO15335 359 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 NCAM2O15394 837 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 SLC16A3O15427 465 aaKnown RBP11.93□□□□□ -0.5
RFFL-204ENST00000414419 CCNE1P24864 410 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 WEE1P30291 646 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 MXI1P50539 228 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 PPP3CAQ08209 521 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 UBXN2BQ14CS0 331 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
RFFL-204ENST00000414419 C1orf220Q5T0J3 134 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 SPOPLQ6IQ16 392 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 ZNF852Q6ZMS4 543 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 TPRG1Q6ZUI0 275 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 CMTM8Q8IZV2 173 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 CELF5Q8N6W0 485 aaKnown RBP11.93□□□□□ -0.5
RFFL-204ENST00000414419 BPIFB1Q8TDL5 484 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
RFFL-204ENST00000414419 NELL2Q99435 816 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 SLC46A2Q9BY10 475 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 TRPC7Q9HCX4 862 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.93□□□□□ -0.5
RFFL-204ENST00000414419 HEBP1Q9NRV9 189 aa11.93□□□□□ -0.5
RFFL-204ENST00000414419 KIF26AQ9ULI4 1882 aaPredicted RBP11.93□□□□□ -0.5
RFFL-204ENST00000414419 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 FAM170BA6NMN3 283 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 F8VP50 259 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 H0Y858 1186 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 BIN1O00499 593 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 MAN2B1O00754 1011 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 DCNP07585 359 aaKnown RBP11.92□□□□□ -0.5
RFFL-204ENST00000414419 NDST1P52848 882 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
RFFL-204ENST00000414419 NHLH1Q02575 133 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TCF15Q12870 199 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 WDR44Q5JSH3 913 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TXNDC8Q6A555 127 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TMEM150AQ86TG1 271 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 ACOT1Q86TX2 421 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 MON1AQ86VX9 555 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 CCDC105Q8IYK2 499 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 DTWD2Q8NBA8 298 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 FBXL13Q8NEE6 735 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 PJA1Q8NG27 643 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TAS1R2Q8TE23 839 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 SDCBP2Q9H190 292 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 CYP3A43Q9HB55 503 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 METTL14Q9HCE5 456 aaKnown RBP11.92□□□□□ -0.5
RFFL-204ENST00000414419 TRPV5Q9NQA5 729 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TRPM5Q9NZQ8 1165 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
RFFL-204ENST00000414419 NME7Q9Y5B8 376 aa11.92□□□□□ -0.5
RFFL-204ENST00000414419 TRAV19A0A0A6YYK7 116 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 CLDN5O00501 218 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 ABL1P00519 1130 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 CKMP06732 381 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 USP17L7P0C7H9 530 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 CD58P19256 250 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 CD72P21854 359 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 ASPAP45381 313 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 PPP3CCP48454 512 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 PDE6CP51160 858 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 KPNA1P52294 538 aaPredicted RBP11.91□□□□□ -0.5
RFFL-204ENST00000414419 PMS1P54277 932 aaKnown RBP11.91□□□□□ -0.5
RFFL-204ENST00000414419 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 FCHO2Q0JRZ9 810 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 IFRD2Q12894 506 aaPredicted RBP11.91□□□□□ -0.5
RFFL-204ENST00000414419 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
RFFL-204ENST00000414419 TTC39CQ8N584 583 aa11.91□□□□□ -0.5
RFFL-204ENST00000414419 TTC16Q8NEE8 873 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms