RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TSC22D2O75157 780 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 PALMO75781 387 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 TIMP1P01033 207 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 ASLP04424 464 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 HDCP19113 662 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 KLRK1P26718 216 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 KIR3DL1P43629 444 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 CD97P48960 835 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 CLCN2P51788 898 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 SRSF1Q07955 248 aaKnown RBP eCLIP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 PPIGQ13427 754 aaKnown RBP eCLIP3.82□□□□□ -1.88e-6■■■■□ 22.7
ECHDC1-205ENST00000368295 SYCP1Q15431 976 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 IFIT1BQ5T764 474 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 IQSEC1Q6DN90 963 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 OGFOD2Q6N063 350 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 CEP68Q76N32 757 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 CDH24Q86UP0 819 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 SHISA5Q8N114 240 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 ESX1Q8N693 406 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 DRAXINQ8NBI3 349 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF540Q8NDQ6 660 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 PPP1R14CQ8TAE6 165 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 RNF141Q8WVD5 230 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 LPAR1Q92633 364 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 KIF1BPQ96EK5 621 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF845Q96IR2 970 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM81BQ96LP2 452 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 RIPOR3Q96MK2 946 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 KREMEN1Q96MU8 473 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 TBCBQ99426 244 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 DESI2Q9BSY9 194 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 UTP14AQ9BVJ6 771 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 STK31Q9BXU1 1019 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 IQCGQ9H095 443 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 SMOC2Q9H3U7 446 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 MKNK2Q9HBH9 465 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 DENND2AQ9ULE3 1009 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 NOSIPQ9Y314 301 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 PCDHA11Q9Y5I1 949 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 N6AMT1Q9Y5N5 214 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 MRFAP1Q9Y605 127 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC30A1Q9Y6M5 507 aa3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 ZFP37Q9Y6Q3 630 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-205ENST00000368295 MAP3K15Q6ZN16 1313 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF521Q96K83 1311 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 A0A087WV62 115 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 LCHNA4D1U4 455 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 GOLGA6L3A6NEY3 463 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 A6NLC8 198 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 KBTBD13C9JR72 458 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 MCF2LO15068 1137 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CYP26A1O43174 497 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ZBTB14O43829 449 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CLEC3AO75596 197 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 OFD1O75665 1012 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 UBOX5O94941 541 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TGDSO95455 350 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 MMEP08473 750 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC172P0C7W6 258 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SRGAP2BP0DMP2 458 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 HSPA5P11021 654 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TNNT1P13805 278 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SPINK2P20155 84 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SSTR4P31391 388 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CYP2C18P33260 490 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ASMTP46597 345 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ALDH3A2P51648 485 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 RBM5P52756 815 aaKnown RBP eCLIP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 GPR85P60893 370 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 MECOMQ03112 1051 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 KLF1Q13351 362 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ADAM15Q13444 863 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ASIC2Q16515 512 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 WSCD2Q2TBF2 565 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 RABL6Q3YEC7 729 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TRIM61Q5EBN2 209 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TREML2Q5T2D2 321 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 MFSD5Q6N075 450 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ALKBH5Q6P6C2 394 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 UNQ6494/PRO21346Q6UXR6 183 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM214BQ7L5A3 538 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 PPP1R42Q7Z4L9 355 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TMCO2Q7Z6W1 182 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SCUBE1Q8IWY4 988 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ARL8AQ96BM9 186 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 DHRS1Q96LJ7 313 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC114Q96M63 670 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC43Q96MW1 224 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC9A7Q96T83 725 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 SLF1Q9BQI6 1058 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 DNAI2Q9GZS0 605 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 TDRD3Q9H7E2 651 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 VPS37BQ9H9H4 285 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 LRRC4CQ9HCJ2 640 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF304Q9HCX3 659 aa3.81□□□□□ -1.8
ECHDC1-205ENST00000368295 CRTAC1Q9NQ79 661 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms