RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TBC1D12O60347 775 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 GABPAQ06546 454 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 LDHDQ86WU2 507 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 SPOCK2Q92563 424 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 ARL8BQ9NVJ2 186 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 KCNK4Q9NYG8 393 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 AP4S1Q9Y587 144 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 GLRA3O75311 464 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PROCP04070 461 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 CHN2P52757 468 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 RPL10AP62906 217 aaKnown RBP16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 ACVR2BQ13705 512 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PID1Q7Z2X4 250 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 HAS1Q92839 578 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 ADNPQ9H2P0 1102 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 MYH10P35580 1976 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 HNRNPRO43390 633 aaKnown RBP16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 NUP107P57740 925 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 FAAP100Q0VG06 881 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 MAPK6Q16659 721 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 RIT2Q99578 217 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 ADGRA3Q8IWK6 1321 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 E9PBE3 544 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 ATP9BO43861 1147 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 KLHL41O60662 606 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 DEAF1O75398 565 aaPredicted RBP16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 E2F6O75461 281 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 SREBF1P36956 1147 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 MFSD7Q6UXD7 560 aa16.62■□□□□ 0.25
CLSTN1-201ENST00000361311 FSCN2O14926 492 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 GPC3P51654 580 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 NPY5RQ15761 445 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 NLRP4Q96MN2 994 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 PALMDQ9NP74 551 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 CDYLQ9Y232 598 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 PMLP29590 882 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 PDK3Q15120 406 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 KCTD21Q4G0X4 260 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 LIN52Q52LA3 116 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 L3MBTL3Q96JM7 780 aaPredicted RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 SNX13Q9Y5W8 968 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 RPTORQ8N122 1335 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 VAV1P15498 845 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 SPRP35270 261 aaPredicted RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 RPL5P46777 297 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 CUL2Q13617 745 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 PAIP1Q9H074 479 aaKnown RBP16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 LRRC4Q9HBW1 653 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
CLSTN1-201ENST00000361311 DHDDSQ86SQ9 333 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 PRUNE1Q86TP1 453 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 CCNJLQ8IV13 435 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 TASP1Q9H6P5 420 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 EFCAB1Q9HAE3 211 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 GPRC5CQ9NQ84 441 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ASTN1O14525 1302 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ZMYM2Q9UBW7 1377 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 LYNP07948 512 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 AP3M2P53677 418 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 WDR72Q3MJ13 1102 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 Q4G0T1 1027 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ARMC3Q5W041 872 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 LAYNQ6UX15 382 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 SLC30A10Q6XR72 485 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ZNF513Q8N8E2 541 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ILKAPQ9H0C8 392 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 RAVER2Q9HCJ3 691 aaKnown RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 TPST1O60507 370 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 PIAS1O75925 651 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 SLC25A3Q00325 362 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 EVX2Q03828 476 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 RNF135Q8IUD6 432 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 ATP6V1E2Q96A05 226 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 DCUN1D5Q9BTE7 237 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 THAP1Q9NVV9 213 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 DGAT1O75907 488 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 CIITAP33076 1130 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 RPS6P62753 249 aaKnown RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 TTC27Q6P3X3 843 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 PATL1Q86TB9 770 aaKnown RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 IFNEQ86WN2 208 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 SH3TC2Q8TF17 1288 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 LENG1Q96BZ8 264 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
CLSTN1-201ENST00000361311 CHKBQ9Y259 395 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms