RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 KLHDC7AQ5VTJ3 777 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 SPATA21Q7Z572 469 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 ANKEF1Q9NU02 776 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 KRT87PA6NCN2 255 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 TRIM16O95361 564 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 PLEKP08567 350 aaPredicted RBP17.78■□□□□ 0.44
COL4A2-201ENST00000360467 OXCT1P55809 520 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 HIST2H2ACQ16777 129 aaPredicted RBP17.78■□□□□ 0.44
COL4A2-201ENST00000360467 HIST2H2AA3Q6FI13 130 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 PLEKHA8Q96JA3 519 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 FBXL21Q9UKT6 434 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
COL4A2-201ENST00000360467 H2AFYO75367 372 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 SERPINI2O75830 405 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 FGFR1P11362 822 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 DARSP14868 501 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 ACAT1P24752 427 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 CHI3L1P36222 383 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 LVRNQ6Q4G3 990 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 EDEM1Q92611 657 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 ALDH8A1Q9H2A2 487 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 MAFGO15525 162 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 MAGEA4P43358 317 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 GLRBP48167 497 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 TBL3Q12788 808 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 PHKG1Q16816 387 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 ALFQ53S48 1182 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 ZNF484Q5JVG2 852 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 PHF21AQ96BD5 680 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 GTF2A1LQ9UNN4 478 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 A0A1B0GTH6 734 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 SPRP35270 261 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 PMS1P54277 932 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 DNAAF5Q86Y56 855 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 STX19Q8N4C7 294 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 SMPD4Q9NXE4 827 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 RUVBL2Q9Y230 463 aaKnown RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 FXR2P51116 673 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 PRR23CQ6ZRP0 262 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 SYDE1Q6ZW31 735 aaPredicted RBP17.77■□□□□ 0.44
COL4A2-201ENST00000360467 TRAPPC12Q8WVT3 735 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 ATG4AQ8WYN0 398 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 KCNQ5Q9NR82 932 aa17.77■□□□□ 0.44
COL4A2-201ENST00000360467 AP1ARQ63HQ0 302 aa17.77■□□□□ 0.43
COL4A2-201ENST00000360467 OSBPL1AQ9BXW6 950 aa17.77■□□□□ 0.43
COL4A2-201ENST00000360467 CEP41Q9BYV8 373 aa17.77■□□□□ 0.43
COL4A2-201ENST00000360467 IARS2Q9NSE4 1012 aaKnown RBP17.77■□□□□ 0.43
COL4A2-201ENST00000360467 PHF20L1A8MW92 1017 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 SKAP2O75563 359 aaPredicted RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CXCL8P10145 99 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 RAG1P15918 1043 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CPA2P48052 419 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 ANO5Q75V66 913 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 VPS50Q96JG6 964 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 PDGFDQ9GZP0 370 aaPredicted RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 MTFR1LQ9H019 292 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 STN1Q9H668 368 aaKnown RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 GHRP10912 638 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 TRADDQ15628 312 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 RABGAP1LQ5R372 815 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 NT5DC3Q86UY8 548 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 TXNRD3Q86VQ6 643 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CBWD1Q9BRT8 395 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 YIPF3Q9GZM5 350 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 TGM2P21980 687 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 DMTNQ08495 405 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 ZBTB17Q13105 803 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 PTK6Q13882 451 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 ACAD10Q6JQN1 1059 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CALML6Q8TD86 181 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CYFIP2Q96F07 1278 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 RHOCP08134 193 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 RBP3P10745 1247 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 KYNUQ16719 465 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 UGP2Q16851 508 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 C16orf59Q7L2K0 433 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 KRT35Q92764 455 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 TSEN34Q9BSV6 310 aaKnown RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 ITIH2P19823 946 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 NPTX2P47972 431 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 BEX3Q00994 111 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 GRB10Q13322 594 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 LAMB3Q13751 1172 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 PTGISQ16647 500 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 OTOAQ7RTW8 1153 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 TFAP2DQ7Z6R9 452 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
COL4A2-201ENST00000360467 FAM172AQ8WUF8 416 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 NT5MQ9NPB1 228 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 ALG6Q9Y672 507 aa17.76■□□□□ 0.43
COL4A2-201ENST00000360467 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
COL4A2-201ENST00000360467 ALDH2P05091 517 aa17.75■□□□□ 0.43
COL4A2-201ENST00000360467 CCDC159P0C7I6 412 aa17.75■□□□□ 0.43
COL4A2-201ENST00000360467 ERVK-10P10266 1014 aa17.75■□□□□ 0.43
COL4A2-201ENST00000360467 MAPRE1Q15691 268 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms