RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SHROOM2Q13796 1616 aa12.52□□□□□ -0.41
PCF11-201ENST00000298281 A0A087WWV3 80 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 TNPO2O14787 897 aaKnown RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 STAT5BP51692 787 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 TMEM132BQ14DG7 1078 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 RABGAP1LQ5R372 815 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 ZCCHC8Q6NZY4 707 aaKnown RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 FRMD8Q9BZ67 464 aaPredicted RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 PRDX5P30044 214 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 TERF2Q15554 542 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 OMA1Q96E52 524 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SPTLC1O15269 473 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 POU1F1P28069 291 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 VIPAS39Q9H9C1 493 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 NMRK2Q9NPI5 230 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 EVA1BQ9NVM1 165 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CHD1O14646 1710 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CENPXA8MT69 81 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 CYLC2Q14093 348 aaPredicted RBP12.51□□□□□ -0.41
PCF11-201ENST00000298281 NCAPHQ15003 741 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 KLHL12Q53G59 568 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 IER5Q5VY09 327 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 IL18RAPO95256 599 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 IL6P05231 212 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 ITIH2P19823 946 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 PGM1P36871 562 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 KDSRQ06136 332 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SMU1Q2TAY7 513 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SGSM3Q96HU1 749 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SMCO3A2RU48 225 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 PCSK1P29120 753 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 C16orf89Q6UX73 402 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CYP4Z1Q86W10 505 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 CDK20Q8IZL9 346 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 SCAIQ8N9R8 606 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 RGS18Q9NS28 235 aa12.51□□□□□ -0.41
PCF11-201ENST00000298281 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 KLHL2O95198 593 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 FGRP09769 529 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 BTBD9Q96Q07 612 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 B2RBV5 119 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 PRKCBP05771 671 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 CHRM3P20309 590 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 CES1P23141 567 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 WEE1P30291 646 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 GRK4P32298 578 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 FCHO2Q0JRZ9 810 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 ZNF211Q13398 564 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 TOB2Q14106 344 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 PMM1Q92871 262 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 USP13Q92995 863 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 OSBPL1AQ9BXW6 950 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 CCDC177Q9NQR7 707 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 COL15A1P39059 1388 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 TBX3O15119 743 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 OR1G1P47890 313 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TRAP1Q12931 704 aaKnown RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 CYP51A1Q16850 503 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 PDZK1Q5T2W1 519 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 RPTNQ6XPR3 784 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 CACTIN-AS1Q8N1I8 211 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 RNF149Q8NC42 400 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TBCDQ9BTW9 1192 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 CATSPERBQ9H7T0 1116 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 SSU72P8A0A1W2PR75 194 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 UMPSP11172 480 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 FGFR1P11362 822 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 ETFBP38117 255 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TRABDQ9H4I3 376 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 NEDD4P46934 1319 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 ALDH9A1P49189 494 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms