RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
SH3RF1-201ENST00000284637 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
SH3RF1-201ENST00000284637 PAFAH2Q99487 392 aa17.09■□□□□ 0.33
SH3RF1-201ENST00000284637 TMEM121Q9BTD3 319 aa17.09■□□□□ 0.33
SH3RF1-201ENST00000284637 SUPT3HB4E1H0 165 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 ZNF263O14978 683 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 WDR47O94967 919 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 NTSR2O95665 410 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 PSMC3P17980 439 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 GIT2Q14161 759 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 KRT72Q14CN4 511 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 ILKAPQ9H0C8 392 aaPredicted RBP17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 LATS2Q9NRM7 1088 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 RPS6KL1Q9Y6S9 549 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 OPLAHO14841 1288 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 HMBSP08397 361 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 KRT16P08779 473 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 CDH2P19022 906 aaPredicted RBP17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 TMEM62Q0P6H9 643 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 PTK2BQ14289 1009 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 TTC23LQ6PF05 361 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 CROCCP3Q8IVE0 287 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 SCFD2Q8WU76 684 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 SH3KBP1Q96B97 665 aa17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.33
SH3RF1-201ENST00000284637 PSMD3O43242 534 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 PEX5P50542 639 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 EZH1Q92800 747 aaPredicted RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 CENPTQ96BT3 561 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 EXOSC4Q9NPD3 245 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 ZNF839A8K0R7 811 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 TFE3P19532 575 aaPredicted RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 SNRPFP62306 86 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 OTUD4Q01804 1114 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 DMPKQ09013 629 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 TBL3Q12788 808 aaKnown RBP17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 GOLGA7BQ2TAP0 167 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 TRAF7Q6Q0C0 670 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 OLFML1Q6UWY5 402 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 EGFL6Q8IUX8 553 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 JADE3Q92613 823 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 VPS50Q96JG6 964 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 TRIM62Q9BVG3 475 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 ATXN10Q9UBB4 475 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 MYO3AQ8NEV4 1616 aa17.08■□□□□ 0.32
SH3RF1-201ENST00000284637 MICU2Q8IYU8 434 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 EFHBQ8N7U6 833 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 TMEM120AQ9BXJ8 343 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 TLR10Q9BXR5 811 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 NAALADL1Q9UQQ1 740 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 ATP6V1C1P21283 382 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 CLK1P49759 484 aaKnown RBP17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 LRRC74AQ0VAA2 488 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 IYDQ6PHW0 289 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 SCAF8Q9UPN6 1271 aaKnown RBP17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 KCNK10P57789 538 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 RASA2Q15283 850 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 BOLA3Q53S33 107 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 FAM162AQ96A26 154 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 GDF3Q9NR23 364 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 MAP3K7CLP57077 242 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 TMCO5AQ8N6Q1 288 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 PGM2Q96G03 612 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 CD274Q9NZQ7 290 aa17.07■□□□□ 0.32
SH3RF1-201ENST00000284637 BGNP21810 368 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 PKN1Q16512 942 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 TFDP3Q5H9I0 405 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SLC47A2Q86VL8 602 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 EIF1ADQ8N9N8 165 aaKnown RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 FRMD8Q9BZ67 464 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SEC23AQ15436 765 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 MFSD4BQ5TF39 518 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 PRR5LQ6MZQ0 368 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 DENND5BQ6ZUT9 1274 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 KIAA0895Q8NCT3 520 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 LPAR1Q92633 364 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ALBP02768 609 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 TGM2P21980 687 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 PTPN7P35236 360 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 PTENP60484 403 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms