RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 GPR158Q5T848 1215 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 PHLDB3Q6NSJ2 640 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 INTS8Q75QN2 995 aaKnown RBP23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 GPIHBP1Q8IV16 184 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 FAM186BQ8IYM0 893 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 MYCBPAPQ8TBZ2 947 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 SMARCE1Q969G3 411 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 PCED1BQ96HM7 432 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 PRRX2Q99811 253 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 SDCBP2Q9H190 292 aa23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 MAGEC2Q9UBF1 373 aaPredicted RBP23.85■■□□□ 1.41
GTF2F1-204ENST00000594965 HEPACAM2A8MVW5 462 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 NOL4O94818 638 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 SMC2O95347 1197 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 TRIM49P0CI25 452 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 TRIM49CP0CI26 452 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 CSH1P0DML2 217 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 CSH2P0DML3 217 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 CDC25CP30307 473 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 MAGEA11P43364 429 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 RAP1GAPP47736 663 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 NUBP1P53384 320 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 NLRP12P59046 1061 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 PFKPQ01813 784 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 ENPEPQ07075 957 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 PPP3CAQ08209 521 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 MLF2Q15773 248 aaPredicted RBP23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 TAF12Q16514 161 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 ZNF667Q5HYK9 610 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 C4orf50Q6ZRC1 276 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 ARID3BQ8IVW6 561 aaPredicted RBP23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 EEF2KMTQ96G04 330 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 DDX23Q9BUQ8 820 aaKnown RBP23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 TASP1Q9H6P5 420 aa23.84■■□□□ 1.41
GTF2F1-204ENST00000594965 SLC38A8A6NNN8 435 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 GALR2O43603 387 aaPredicted RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 PSMC3P17980 439 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 PTPN1P18031 435 aaKnown RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 BDNFP23560 247 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 PMS1P54277 932 aaKnown RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 NHLH1Q02575 133 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MAPRE1Q15691 268 aaKnown RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 SGSM1Q2NKQ1 1148 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MDH1BQ5I0G3 518 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MFSD6LQ8IWD5 586 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 SCN4BQ8IWT1 228 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 LRRC3BQ96PB8 259 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 TRMT61BQ9BVS5 477 aaKnown RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 SLC46A2Q9BY10 475 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MAN1B1Q9UKM7 699 aa23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MAGED2Q9UNF1 606 aaPredicted RBP23.83■■□□□ 1.41
GTF2F1-204ENST00000594965 MYH10P35580 1976 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 SHISA7A6NL88 538 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 TADA3O75528 432 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 ASS1P00966 412 aaKnown RBP23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 HLA-DRAP01903 254 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 WEE1P30291 646 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 GCLMP48507 274 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 CYP27A1Q02318 531 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 PRKCQQ04759 706 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 ARHGAP15Q53QZ3 475 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 SPOPLQ6IQ16 392 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 ZC3H3Q8IXZ2 948 aaKnown RBP23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 ADSSL1Q8N142 457 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 DEPDC1BQ8WUY9 529 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 TRMT2BQ96GJ1 504 aaKnown RBP23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 MYRFLQ96LU7 910 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 FOXQ1Q9C009 403 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 CHMP5Q9NZZ3 219 aa23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 HOOK1Q9UJC3 728 aaKnown RBP23.82■■□□□ 1.4
GTF2F1-204ENST00000594965 HELZP42694 1942 aaKnown RBP23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 A8MXQ7 604 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 STK25O00506 426 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 KINO60870 393 aaKnown RBP23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 PRAMEF12O95522 483 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 KRT13P13646 458 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 GDI1P31150 447 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 PTPN5P54829 565 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 ANKRD40Q6AI12 368 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 ISM2Q6H9L7 571 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 VSTM1Q6UX27 236 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 SCARA5Q6ZMJ2 495 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 TAF4BQ92750 862 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 DNASE1L2Q92874 299 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 E2F7Q96AV8 911 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 GCNAQ96QF7 691 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 BRD9Q9H8M2 597 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 HEBP1Q9NRV9 189 aa23.81■■□□□ 1.4
GTF2F1-204ENST00000594965 PATJQ8NI35 1801 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 TRIM49BA6NDI0 452 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 ARNTLO00327 626 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 LRRN2O75325 713 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 CD44P16070 742 aaKnown RBP23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 BMP6P22004 513 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 PIK3CAP42336 1068 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 CACNA2D1P54289 1103 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 FCHO2Q0JRZ9 810 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 CCDC105Q8IYK2 499 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 B3GALNT2Q8NCR0 500 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 TAS1R2Q8TE23 839 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms