RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 HMGA1P17096 107 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 POLR2BP30876 1174 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 RPS9P46781 194 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 TUBB4BP68371 445 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 ASIC1P78348 528 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CLDN10P78369 228 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 AMPD3Q01432 767 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 DUSP4Q13115 394 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 ANGPT1Q15389 498 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CFAP221Q4G0U5 840 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 WSCD1Q658N2 575 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 SCARA3Q6AZY7 606 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TANGO2Q6ICL3 276 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 DSTYKQ6XUX3 929 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 NYAP1Q6ZVC0 841 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 STXBP4Q6ZWJ1 553 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 DPH6Q7L8W6 267 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 LRRTM3Q86VH5 581 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CBWD2Q8IUF1 395 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 WDR49Q8IV35 697 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 LRRC8AQ8IWT6 810 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 MAML2Q8IZL2 1156 aaPredicted RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 TMEM86AQ8N2M4 240 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 ELMOD1Q8N336 334 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 KIAA0895Q8NCT3 520 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 FLCNQ8NFG4 579 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 KBTBD7Q8WVZ9 684 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 HPS3Q969F9 1004 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 E2F7Q96AV8 911 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 DHX58Q96C10 678 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 RSPRY1Q96DX4 576 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 MSANTD3Q96H12 275 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 FUBP3Q96I24 572 aaKnown RBP eCLIP7.39□□□□□ -1.23
SPG11-224ENST00000561268 SHDQ96IW2 340 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 PGLYRP2Q96PD5 576 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 PYM1Q9BRP8 204 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 IER2Q9BTL4 223 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 FOXQ1Q9C009 403 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 GPR88Q9GZN0 384 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 KIAA1586Q9HCI6 787 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 PDE11AQ9HCR9 933 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 PRMT8Q9NR22 394 aaPredicted RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 AGPAT3Q9NRZ7 376 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 FAM86C1Q9NVL1 165 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TBC1D7Q9P0N9 293 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 ZMYM5Q9UJ78 669 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 HOOK1Q9UJC3 728 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 MUC22E2RYF6 1773 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 GOLGA6L9A6NEM1 432 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 BECN2A8MW95 431 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 H0Y858 1186 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 POLR2DO15514 142 aaKnown RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 CBFA2T2O43439 604 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 NOL4O94818 638 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 KIF20AO95235 890 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 FGF19O95750 216 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 MYL1P05976 194 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 HAPLN1P10915 354 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 TDGF1P13385 188 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 PSMC3P17980 439 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 TUFMP49411 452 aaKnown RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 EPHB3P54753 998 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ARPP19P56211 112 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 MCCD1P59942 119 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 CYP24A1Q07973 514 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 PSMD6Q15008 389 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 SURF1Q15526 300 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 TEAD2Q15562 447 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 NFE2Q16621 373 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 ZNF528Q3MIS6 628 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 WDR44Q5JSH3 913 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 INTS6LQ5JSJ4 861 aaKnown RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 STXBP5Q5T5C0 1151 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ASCL5Q7RTU5 278 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 CCDC186Q7Z3E2 898 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ITIH5Q86UX2 942 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 LUZP1Q86V48 1076 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 OSTM1Q86WC4 334 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 SLC9A9Q8IVB4 645 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 MFSD6LQ8IWD5 586 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 OR5B17Q8NGF7 314 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ZSCAN18Q8TBC5 510 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 MCRS1Q96EZ8 462 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 FAM84AQ96KN4 292 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 MYRFLQ96LU7 910 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 CEP295NLQ96MC4 621 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ZNF512Q96ME7 567 aaPredicted RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 ZSWIM3Q96MP5 696 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms