RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DYDC1Q8WWB3 177 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SLCO2A1Q92959 643 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 METTL5Q9NRN9 209 aaKnown RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 FGFR1OP2Q9NVK5 253 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SIP14410 1827 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 POC1B-GALNT4F8VUJ3 575 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 INSRRP14616 1297 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 TMED2Q15363 201 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 TRIM72Q6ZMU5 477 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 ANKS4BQ8N8V4 417 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 TMEM35BQ8NCS4 154 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 PAIP2Q9BPZ3 127 aaKnown RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 ZNF408Q9H9D4 720 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 PTPRHQ9HD43 1115 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 TCP11X1B4DZS4 312 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 SGK1O00141 431 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 ERBB2P04626 1255 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 CDC25CP30307 473 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 EFNA5P52803 228 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 PSMC1P62191 440 aaKnown RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 SPDYCQ5MJ68 293 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 C12orf29Q8N999 325 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 ELOVL4Q9GZR5 314 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 SYNCQ9H7C4 482 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 CNOT10Q9H9A5 744 aaKnown RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 IFT122Q9HBG6 1241 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 SPATS2LQ9NUQ6 558 aaKnown RBP15.55■□□□□ 0.08
DDX55-209ENST00000542286 NAALADL1Q9UQQ1 740 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 AKT3Q9Y243 479 aa15.55■□□□□ 0.08
DDX55-209ENST00000542286 HCRTO43612 131 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 GJA5P36382 358 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 RIPK1Q13546 671 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 CDO1Q16878 200 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 ANKRD22Q5VYY1 191 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 CCDC62Q6P9F0 684 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 CCDC33Q8N5R6 958 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 HSPH1Q92598 858 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 SLC12A4Q9UP95 1085 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 IGKV6-21A0A0C4DH24 114 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.54■□□□□ 0.08
DDX55-209ENST00000542286 ACKR2O00590 384 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 LRCH4O75427 683 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 STAG3L1P0CL83 205 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 BRAFP15056 766 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 MAGEA4P43358 317 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 RAD23BP54727 409 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 MMRN1Q13201 1228 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 MOGSQ13724 837 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 EFTUD2Q15029 972 aaKnown RBP eCLIP15.54■□□□□ 0.082e-11■■■■■ 32.6
DDX55-209ENST00000542286 TNFAIP8L3Q5GJ75 292 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 GRK7Q8WTQ7 553 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 SPOCK2Q92563 424 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 CDCA5Q96FF9 252 aa15.54■□□□□ 0.08
DDX55-209ENST00000542286 hCG_1818297A0A087WSY0 165 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 TNNC2P02585 160 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 TGFB3P10600 412 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 KRT3P12035 628 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 GBP1P32455 592 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CDKN2BP42772 138 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 MXD4Q14582 209 aaPredicted RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 MAP1SQ66K74 1059 aaPredicted RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 NPNTQ6UXI9 565 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 AGAP11Q8TF27 550 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 RUNDC3BQ96NL0 473 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 FZD8Q9H461 694 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 RPF1Q9H9Y2 349 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 ABCF3Q9NUQ8 709 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 AGTPBP1Q9UPW5 1226 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 KAT6AQ92794 2004 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 TCRBV7S3A2A0A539 114 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 GSTA1P08263 222 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 PROZP22891 400 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 POLR2BP30876 1174 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 ADCYAP1R1P41586 468 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 IREB2P48200 963 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 RGS7P49802 495 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CAPRIN2Q6IMN6 1127 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 TSHZ1Q6ZSZ6 1077 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ZBED8Q8IZ13 594 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CCDC89Q8N998 374 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ACTL9Q8TC94 416 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 VCPIP1Q96JH7 1222 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 C12orf65Q9H3J6 166 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 PPP2R3BQ9Y5P8 575 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CST8O60676 142 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CALB1P05937 261 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 OTUD4Q01804 1114 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 C15orf59Q2T9L4 293 aaPredicted RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 ZNF667Q5HYK9 610 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ERO1BQ86YB8 467 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 C4orf33Q8N1A6 199 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 CCHCR1Q8TD31 782 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 MICAL1Q8TDZ2 1067 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms