RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PTDSS2Q9BVG9 487 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TRIM54Q9BYV2 358 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 ARHGEF3Q9NR81 526 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 CNNM1Q9NRU3 951 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 SERTAD4Q9NUC0 356 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TBC1D30Q9Y2I9 924 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TMX2Q9Y320 296 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TNFRSF18Q9Y5U5 241 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 AOX1Q06278 1338 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 A0A1W2PPL8 197 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 H0YIZ8 118 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 CTNND1O60716 968 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 PROP1O75360 226 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 S100BP04271 92 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 FESP07332 822 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 CSF1RP07333 972 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 HNRNPCP07910 306 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 ADORA2AP29274 412 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 PPIFP30405 207 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 VIPR2P41587 438 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 AGFG1P52594 562 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 CTBP1Q13363 440 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 GTF2H3Q13889 308 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 LLGL1Q15334 1064 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 FAM153CQ494X1 144 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 TMEM119Q4V9L6 283 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZNF618Q5T7W0 954 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZKSCAN2Q63HK3 967 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZNF551Q7Z340 670 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 GLG1Q92896 1179 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 CXorf36Q9H7Y0 433 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 PIH1D1Q9NWS0 290 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 DDX20Q9UHI6 824 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 NDRG4Q9ULP0 352 aaKnown RBP4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 PADI4Q9UM07 663 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 EID1Q9Y6B2 187 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 WNT6Q9Y6F9 365 aa4.29□□□□□ -1.72
HMGB1P29-201ENST00000505659 USP19O94966 1318 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 A0A087WWL8 130 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 GCOM1H8Y6P7 765 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 BTN3A1O00481 513 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZNF213O14771 459 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 SLC16A3O15427 465 aaKnown RBP4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 VNN1O95497 513 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 CYP2C18P33260 490 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 TFF2Q03403 129 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 FOXF2Q12947 444 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 MYO1EQ12965 1108 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 NFE2Q16621 373 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 ANO6Q4KMQ2 910 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 FAM102BQ5T8I3 360 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 DEPDC1Q5TB30 811 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 FCRLBQ6BAA4 426 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 IL31RAQ8NI17 732 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 RAPGEF4Q8WZA2 1011 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 MAML1Q92585 1016 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 NELL2Q99435 816 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 MACROD1Q9BQ69 325 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 MESP1Q9BRJ9 268 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 G3BP2Q9UN86 482 aaKnown RBP4.28□□□□□ -1.72
HMGB1P29-201ENST00000505659 A1L4Q6 167 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 ERC2O15083 957 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 TBX3O15119 743 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 NXPH3O95157 252 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 NDUFB7P17568 137 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 ENGP17813 658 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SLC7A1P30825 629 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 ATXN1P54253 815 aaKnown RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 PLAC9Q5JTB6 97 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 TEDDM1Q5T9Z0 273 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 CXorf57Q6NSI4 855 aaKnown RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 ZNF783Q6ZMS7 281 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 ZNF782Q6ZMW2 699 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SRRM1Q8IYB3 904 aaKnown RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 MPP5Q8N3R9 675 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 TMEM171Q8WVE6 324 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 KBTBD7Q8WVZ9 684 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 REPS1Q96D71 796 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 C22orf23Q9BZE7 217 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SMURF2Q9HAU4 748 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 STK32BQ9NY57 414 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SH3BP4Q9P0V3 963 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SHOC2Q9UQ13 582 aa4.27□□□□□ -1.73
HMGB1P29-201ENST00000505659 SHROOM4Q9ULL8 1493 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 TARM1B6A8C7 271 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 MYO1CO00159 1063 aa4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 PHGDHO43175 533 aaKnown RBP4.26□□□□□ -1.73
HMGB1P29-201ENST00000505659 TLR5O60602 858 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms