RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RNF207Q6ZRF8 634 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 SYTL1Q8IYJ3 562 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 FAM9AQ8IZU1 332 aaPredicted RBP4.75□□□□□ -1.65
CLK1-213ENST00000492793 SPARTQ8N0X7 666 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 B3GALNT2Q8NCR0 500 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 POF1BQ8WVV4 589 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 PPP2R3CQ969Q6 453 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 NACC2Q96BF6 587 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
CLK1-213ENST00000492793 BOD1Q96IK1 185 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 CRB3Q9BUF7 120 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 SELENOOQ9BVL4 669 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 ZNF341Q9BYN7 854 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 SLC2A4RGQ9NR83 387 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 INTS13Q9NVM9 706 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 TBCCD1Q9NVR7 557 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 ANKFY1Q9P2R3 1169 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 MAN2B2Q9Y2E5 1009 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.75□□□□□ -1.65
CLK1-213ENST00000492793 KAT6AQ92794 2004 aa4.75□□□□□ -1.65
CLK1-213ENST00000492793 E7ENX8 843 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 PIAS2O75928 621 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 FGF18O76093 207 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 INMTO95050 263 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 ITGAMP11215 1152 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 IL1R1P14778 569 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 YY1P25490 414 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 PTGS2P35354 604 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 CPT1AP50416 773 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 VAV2P52735 878 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 TAP2Q03519 686 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 TCF15Q12870 199 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 HLXQ14774 488 aaPredicted RBP4.74□□□□□ -1.65
CLK1-213ENST00000492793 CDSNQ15517 529 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 ELF2Q15723 593 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 RGS7BPQ6MZT1 257 aaPredicted RBP4.74□□□□□ -1.65
CLK1-213ENST00000492793 ARMC6Q6NXE6 501 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 KCNV1Q6PIU1 500 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 KCTD20Q7Z5Y7 419 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 EXOC8Q8IYI6 725 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLK1-213ENST00000492793 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 Q8NA96 180 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 TOR1AIP2Q8NFQ8 470 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 SLC30A5Q8TAD4 765 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 BPIFB1Q8TDL5 484 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 BRI3BPQ8WY22 251 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 HAS1Q92839 578 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 MUL1Q969V5 352 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 MESP1Q9BRJ9 268 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 MAGEB5Q9BZ81 275 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 UNKLQ9H9P5 680 aaKnown RBP4.74□□□□□ -1.65
CLK1-213ENST00000492793 CASS4Q9NQ75 786 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 HEYLQ9NQ87 328 aaPredicted RBP4.74□□□□□ -1.65
CLK1-213ENST00000492793 MYO1AQ9UBC5 1043 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 SERTAD3Q9UJW9 196 aa4.74□□□□□ -1.65
CLK1-213ENST00000492793 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SRGAP2O75044 1071 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 PPFIA4O75335 1185 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SPDEFO95238 335 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 IDEP14735 1019 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 BTF3P20290 206 aaKnown RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 NR4A1P22736 598 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 GATA3P23771 443 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 EEF1GP26641 437 aaKnown RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 TRAPPC10P48553 1259 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 HSPA7P48741 367 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 HTRA4P83105 476 aaPredicted RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 TNFAIP2Q03169 654 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 EFEMP1Q12805 493 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 MYO1EQ12965 1108 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 EIF2B5Q13144 721 aaKnown RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 TUBA3CQ13748 450 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SLC35G1Q2M3R5 365 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 GRAMD1BQ3KR37 738 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 LSM12Q3MHD2 195 aaKnown RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 ZIK1Q3SY52 487 aaPredicted RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 DGKKQ5KSL6 1271 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 DEPDC1Q5TB30 811 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 VPS53Q5VIR6 699 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SFRP4Q6FHJ7 346 aaPredicted RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 TUBA3EQ6PEY2 450 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SPRED1Q7Z699 444 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 GAS2L3Q86XJ1 694 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 FANCBQ8NB91 859 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 PROKR1Q8TCW9 393 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 FAM136AQ96C01 138 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 MYEOVQ96EZ4 313 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 PTDSS2Q9BVG9 487 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 ZNF703Q9H7S9 590 aaPredicted RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 PPCSQ9HAB8 311 aa4.73□□□□□ -1.65
CLK1-213ENST00000492793 TRMT13Q9NUP7 481 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms