RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
NUP50-215ENST00000484186 SLC39A2Q9NP94 309 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 GKN1Q9NS71 199 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 GTSE1Q9NYZ3 720 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
NUP50-215ENST00000484186 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
NUP50-215ENST00000484186 CDH9Q9ULB4 789 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 F5P12259 2224 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
NUP50-215ENST00000484186 COL4A2P08572 1712 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 LILRB5O75023 590 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 ATP2C2O75185 946 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 NOL4O94818 638 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 DLATP10515 647 aaKnown RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 WARSP23381 471 aaKnown RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 LMO2P25791 158 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CTHP32929 405 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 MAGEA11P43364 429 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 ID4P47928 161 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CXCL12P48061 93 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CYP2J2P51589 502 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CCR3P51677 355 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 NRLP54845 237 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 TNK2Q07912 1038 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CYP24A1Q07973 514 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 LRRC32Q14392 662 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 PSMD6Q15008 389 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 BMT2Q1RMZ1 405 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 ITPRIPL2Q3MIP1 535 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 DGKKQ5KSL6 1271 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 SCN4BQ8IWT1 228 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 KBTBD7Q8WVZ9 684 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 TRMT2BQ96GJ1 504 aaKnown RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 MYRFLQ96LU7 910 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 CGRRF1Q99675 332 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 HINFPQ9BQA5 517 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 SYT15Q9BQS2 421 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 TDP1Q9NUW8 608 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 MAGEC2Q9UBF1 373 aaPredicted RBP10.1□□□□□ -0.79
NUP50-215ENST00000484186 SERTAD1Q9UHV2 236 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 FANCMQ8IYD8 2048 aa10.1□□□□□ -0.79
NUP50-215ENST00000484186 TACC1O75410 805 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 PDGFRBP09619 1106 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 SLFN14P0C7P3 912 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 TDGF1P13385 188 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 GNL1P36915 607 aaPredicted RBP10.09□□□□□ -0.79
NUP50-215ENST00000484186 GAS6Q14393 721 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 ZNF268Q14587 947 aaPredicted RBP10.09□□□□□ -0.79
NUP50-215ENST00000484186 PON2Q15165 354 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
NUP50-215ENST00000484186 KNOP1Q1ED39 458 aaKnown RBP10.09□□□□□ -0.79
NUP50-215ENST00000484186 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 VSTM1Q6UX27 236 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 KIAA2013Q8IYS2 634 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 SYNPOQ8N3V7 929 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 DCLK2Q8N568 766 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 ZNF516Q92618 1163 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 MYLPFQ96A32 169 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 CCDC127Q96BQ5 260 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 FAM83CQ9BQN1 747 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 CRTAC1Q9NQ79 661 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
NUP50-215ENST00000484186 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
NUP50-215ENST00000484186 NUP210Q8TEM1 1887 aaPredicted RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 ACTN4O43707 911 aaKnown RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 KLRC4O43908 158 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 EXOC3O60645 756 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 TADA3O75528 432 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 BDNFP23560 247 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 ATICP31939 592 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 GRIK1P39086 918 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 PSMC1P62191 440 aaKnown RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 SATB1Q01826 763 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 CYP27A1Q02318 531 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 STK4Q13043 487 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 PSMD2Q13200 908 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 TRPC3Q13507 836 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 RUNX3Q13761 415 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 WDR72Q3MJ13 1102 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 TRIM68Q6AZZ1 485 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
NUP50-215ENST00000484186 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
NUP50-215ENST00000484186 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 862.3 ms