RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 IMPG2Q9BZV3 1241 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.65■■□□□ 1.77e-9■■■■■ 45.9
CPNE1-223ENST00000475146 ARHGEF3Q9NR81 526 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 KRBA1A5PL33 1030 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 TRIM49BA6NDI0 452 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 BIN1O00499 593 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 BDNFP23560 247 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 AVPR2P30518 371 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 CDH8P55286 799 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 CYP4F8P98187 520 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 FKBP3Q00688 224 aaKnown RBP25.64■■□□□ 1.7
CPNE1-223ENST00000475146 LRRC63Q05C16 580 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 GRM2Q14416 872 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 MYCBPAPQ8TBZ2 947 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 TAF4BQ92750 862 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 PCED1BQ96HM7 432 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 DPEP3Q9H4B8 488 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 IL21Q9HBE4 155 aa25.64■■□□□ 1.7
CPNE1-223ENST00000475146 ZDBF2Q9HCK1 2354 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 STK25O00506 426 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 ASS1P00966 412 aaKnown RBP25.63■■□□□ 1.69
CPNE1-223ENST00000475146 HMGA1P17096 107 aaKnown RBP25.63■■□□□ 1.69
CPNE1-223ENST00000475146 PTPN1P18031 435 aaKnown RBP25.63■■□□□ 1.69
CPNE1-223ENST00000475146 PPP1R2P41236 205 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 VIPR2P41587 438 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 MAGEA11P43364 429 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 ASTLQ6HA08 431 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-223ENST00000475146 SPOPLQ6IQ16 392 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 KLHL10Q6JEL2 608 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 TAS1R2Q8TE23 839 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 DHTKD1Q96HY7 919 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-223ENST00000475146 SDCBP2Q9H190 292 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 TMEM8AQ9HCN3 771 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 ZNF318Q5VUA4 2279 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 TRIOO75962 3097 aa25.63■■□□□ 1.69
CPNE1-223ENST00000475146 SLC38A8A6NNN8 435 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 SLC16A3O15427 465 aaKnown RBP25.62■■□□□ 1.69
CPNE1-223ENST00000475146 CCNE1P24864 410 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 PFKPQ01813 784 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 DCAF17Q5H9S7 520 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-223ENST00000475146 CWF19L1Q69YN2 538 aaKnown RBP25.62■■□□□ 1.69
CPNE1-223ENST00000475146 VSTM1Q6UX27 236 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 B3GALNT2Q8NCR0 500 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 TRPV4Q9HBA0 871 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 KMT2EQ8IZD2 1858 aa25.62■■□□□ 1.69
CPNE1-223ENST00000475146 CD44P16070 742 aaKnown RBP25.61■■□□□ 1.69
CPNE1-223ENST00000475146 NPR3P17342 541 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 ANXA13P27216 316 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 GTF2H1P32780 548 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 GRIK1P39086 918 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 NLRP12P59046 1061 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 NOP14P78316 857 aaKnown RBP25.61■■□□□ 1.69
CPNE1-223ENST00000475146 IER5LQ5T953 404 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 TCERG1LQ5VWI1 586 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 KRT39Q6A163 491 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 VITQ6UXI7 678 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 ZC3H3Q8IXZ2 948 aaKnown RBP25.61■■□□□ 1.69
CPNE1-223ENST00000475146 CCDC150Q8NCX0 1101 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 TASP1Q9H6P5 420 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 TBC1D17Q9HA65 648 aa25.61■■□□□ 1.69
CPNE1-223ENST00000475146 UXTQ9UBK9 157 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-223ENST00000475146 STX10O60499 249 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 NOL4O94818 638 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 MXI1P50539 228 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 CLCN5P51795 746 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 MORC3Q14149 939 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 GPIHBP1Q8IV16 184 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 ARID3BQ8IVW6 561 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-223ENST00000475146 TMEM105Q8N8V8 129 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 DEPDC1BQ8WUY9 529 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 E2F7Q96AV8 911 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 TNIP3Q96KP6 325 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 TRMT61BQ9BVS5 477 aaKnown RBP25.6■■□□□ 1.69
CPNE1-223ENST00000475146 KCNH6Q9H252 994 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 BRD9Q9H8M2 597 aa25.6■■□□□ 1.69
CPNE1-223ENST00000475146 ARIH1Q9Y4X5 557 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-223ENST00000475146 HEPACAM2A8MVW5 462 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 DPYSL4O14531 572 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 F11P03951 625 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 PSMC3P17980 439 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 BMP6P22004 513 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 ASPAP45381 313 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 CAMK4Q16566 473 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 NELFBQ8WX92 580 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 MRPS31Q92665 395 aaKnown RBP25.59■■□□□ 1.69
CPNE1-223ENST00000475146 ZNF518BQ9C0D4 1074 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 ELOVL4Q9GZR5 314 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 CTNND2Q9UQB3 1225 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 NCANO14594 1321 aa25.59■■□□□ 1.69
CPNE1-223ENST00000475146 CLDN5O00501 218 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 TRIM66O15016 1216 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 GDI1P31150 447 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 MLF2Q15773 248 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-223ENST00000475146 TMEM150AQ86TG1 271 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 YAF2Q8IY57 180 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 RSPRY1Q96DX4 576 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 TRMT2BQ96GJ1 504 aaKnown RBP25.58■■□□□ 1.69
CPNE1-223ENST00000475146 SHDQ96IW2 340 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 MED10Q9BTT4 135 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 B3GNT5Q9BYG0 378 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms