RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CD300LGQ6UXG3 332 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CDR2LQ86X02 465 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 SMAP1Q8IYB5 467 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 MAB21L3Q8N8X9 362 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 PSMG2Q969U7 264 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 TOE1Q96GM8 510 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 PGBD1Q96JS3 809 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 YTHDC1Q96MU7 727 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 MDFIQ99750 246 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 UNKQ9C0B0 810 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 SLC6A17Q9H1V8 727 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CXCL16Q9H2A7 254 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ADNPQ9H2P0 1102 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 CRISPLD1Q9H336 500 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 KIF9Q9HAQ2 790 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 MAFFQ9ULX9 164 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 VPS4AQ9UN37 437 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 ARID2Q68CP9 1835 aa7.26□□□□□ -1.25
HDAC3-206ENST00000471968 MYH9P35579 1960 aaKnown RBP7.26□□□□□ -1.25
HDAC3-206ENST00000471968 WDR64B1ANS9 1081 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 TMEM189-UBE2V1I3L0A0 370 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 PAPSS1O43252 624 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 HNRNPRO43390 633 aaKnown RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 SOAT2O75908 522 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 ITGAVP06756 1048 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 ABCB4P21439 1286 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 CDC25CP30307 473 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 AXLP30530 894 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 MLLT10P55197 1068 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 SLFN5Q08AF3 891 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 NCBP1Q09161 790 aaKnown RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 DUSP4Q13115 394 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 KCNAB2Q13303 367 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 TEAD4Q15561 434 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 PRAMEF14Q5SWL7 426 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 IFIT1BQ5T764 474 aaKnown RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 SGMS1Q86VZ5 419 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 FAM114A1Q8IWE2 563 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 C3orf58Q8NDZ4 430 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 NSUN7Q8NE18 718 aaKnown RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 C1orf216Q8TAB5 229 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 SNX19Q92543 992 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 RNF41Q9H4P4 317 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 ZNF71Q9NQZ8 489 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-206ENST00000471968 SATB2Q9UPW6 733 aa7.25□□□□□ -1.25
HDAC3-206ENST00000471968 TMEM131Q92545 1883 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 A0A1B0GTQ1 180 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 A0A1W2PQF6 199 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 METTL12A8MUP2 240 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 BTBD18B2RXH4 712 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 TBX3O15119 743 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 CSO75390 466 aaKnown RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 KAT7O95251 611 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 VNN2O95498 520 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 NADKO95544 446 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 APODP05090 189 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 CKMT2P17540 419 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 SLC6A11P48066 632 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 DUSP3P51452 185 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 ASIC1P78348 528 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 KDSRQ06136 332 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 KCNT1Q5JUK3 1230 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 KIAA1324Q6UXG2 1013 aaKnown RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 SPNS3Q6ZMD2 512 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 KANSL1Q7Z3B3 1105 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 C12orf40Q86WS4 652 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 PLA2G4DQ86XP0 818 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 SLC34A3Q8N130 599 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 CADM4Q8NFZ8 388 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 PDCD6IPQ8WUM4 868 aaKnown RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 PRPF31Q8WWY3 499 aaKnown RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 SLC46A1Q96NT5 459 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 DEPDC7Q96QD5 511 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 CEP89Q96ST8 783 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 ZNF577Q9BSK1 485 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 FUCA2Q9BTY2 467 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 LINC00597Q9H2U6 94 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 IL21Q9HBE4 155 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 CASS4Q9NQ75 786 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 WSB2Q9NYS7 404 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-206ENST00000471968 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 ASB3Q9Y575 518 aa7.24□□□□□ -1.25
HDAC3-206ENST00000471968 MYMKA6NI61 221 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 RAB11FIP3O75154 756 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 FAM155BO75949 473 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 NFATC1O95644 943 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 CT47B1P0C2W7 299 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-206ENST00000471968 OR4Q2P0C623 313 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 SMARCA1P28370 1054 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 NMT1P30419 496 aaKnown RBP7.23□□□□□ -1.25
HDAC3-206ENST00000471968 CTSKP43235 329 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 E2F1Q01094 437 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 MORC3Q14149 939 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 MRPL58Q14197 206 aaKnown RBP7.23□□□□□ -1.25
HDAC3-206ENST00000471968 UPP1Q16831 310 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 GAB4Q2WGN9 574 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 TXNDC8Q6A555 127 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 ZNF280DQ6N043 979 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 FOXR1Q6PIV2 292 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms