RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 LRIT1Q9P2V4 623 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 SERTAD3Q9UJW9 196 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 COL11A2P13942 1736 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 LINC00473A8K010 186 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 CSF1RP07333 972 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 BRAFP15056 766 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 FMO1Q01740 532 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 CNGA2Q16280 664 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 AMOTQ4VCS5 1084 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 KAZNQ674X7 775 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 LMBRD2Q68DH5 695 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 RGS7BPQ6MZT1 257 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 MPP5Q8N3R9 675 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 FKBP10Q96AY3 582 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 APIPQ96GX9 242 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 MS4A7Q9GZW8 240 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 R3HDMLQ9H3Y0 253 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 DDX21Q9NR30 783 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 KLC4Q9NSK0 619 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 SACM1LQ9NTJ5 587 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 COL20A1Q9P218 1284 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 C11orf21Q9P2W6 132 aa5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 NDRG4Q9ULP0 352 aaKnown RBP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P49-201ENST00000418882 TRIM43BA6NCK2 446 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 F8W8V4 182 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 GOLIM4O00461 696 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 C1QL1O75973 258 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 IL1R1P14778 569 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 LIPAP38571 399 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 CLCN2P51788 898 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 CACNB3P54284 484 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 NXPH1P58417 271 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 RPS16P62249 146 aaKnown RBP5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 FAM193AP78312 1265 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 MYO1EQ12965 1108 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 POLD3Q15054 466 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 DARS2Q6PI48 645 aaKnown RBP5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 ATG4AQ8WYN0 398 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 TRIM43Q96BQ3 446 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 C8orf48Q96LL4 319 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 PTDSS2Q9BVG9 487 aa5.54□□□□□ -1.52
HMGB1P49-201ENST00000418882 TBC1D4O60343 1298 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 NR2F6P10588 404 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 JUPP14923 745 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 ADORA2AP29274 412 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 PPIFP30405 207 aaKnown RBP5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 GRIA3P42263 894 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 WNT3P56703 355 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 INHBEP58166 350 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 TBCCQ15814 346 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 NBPF8Q3BBV2 869 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 PLA1AQ53H76 456 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 ICE2Q659A1 982 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 LAYNQ6UX15 382 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 SLC9A6Q92581 669 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 NMD3Q96D46 503 aaKnown RBP5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 PBKQ96KB5 322 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 ZNF518BQ9C0D4 1074 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 KLK15Q9H2R5 256 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 ZNHIT2Q9UHR6 403 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 ST3GAL5Q9UNP4 418 aa5.53□□□□□ -1.52
HMGB1P49-201ENST00000418882 FER1L4A9Z1Z3 1794 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZAR1LA6NP61 321 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 ISM1B1AKI9 464 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 MYO1CO00159 1063 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 SUV39H1O43463 412 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 NUDT3O95989 172 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 SLC5A1P13866 664 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 KCNA3P22001 575 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 ITPKBP27987 946 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 PURAQ00577 322 aaKnown RBP5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 RAB32Q13637 225 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 SMN1Q16637 294 aaKnown RBP5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 PTCHD3Q3KNS1 767 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 KCTD20Q7Z5Y7 419 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 LRRC27Q9C0I9 530 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 AS3MTQ9HBK9 375 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 ASB6Q9NWX5 421 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 AFF4Q9UHB7 1163 aaKnown RBP5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 TLK1Q9UKI8 766 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 ADAM21Q9UKJ8 722 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 SHOC2Q9UQ13 582 aa5.52□□□□□ -1.53
HMGB1P49-201ENST00000418882 PYCARD-AS1I3L0S3 204 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 MARCH6O60337 910 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 VNN1O95497 513 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 MAP4K4O95819 1239 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 DGKEP52429 567 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 CACNA2D1P54289 1103 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 NANOS3P60323 173 aaKnown RBP5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 LY6KQ17RY6 165 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 DTX2Q86UW9 622 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 BPIFB1Q8TDL5 484 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 TMEM171Q8WVE6 324 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 GLG1Q92896 1179 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZG16BQ96DA0 208 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 SUCLG2Q96I99 432 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms