RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MCM9Q9NXL9 1143 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
HERC3-203ENST00000407637 AP4B1Q9Y6B7 739 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 F5H6K3 240 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 ITM2AO43736 263 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 GCNT3O95395 438 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 KLRC2P26717 231 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 ADSSP30520 456 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 ALDH1A3P47895 512 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 MYL7Q01449 175 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 CNGA3Q16281 694 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
HERC3-203ENST00000407637 SYCP2LQ5T4T6 812 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 OGFRL1Q5TC84 451 aaPredicted RBP13.39□□□□□ -0.27
HERC3-203ENST00000407637 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 ZNF804AQ7Z570 1209 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 LZTR1Q8N653 840 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 OSBPL6Q9BZF3 934 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 Q9H521 79 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 UVRAGQ9P2Y5 699 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
HERC3-203ENST00000407637 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.271e-8■■■■■ 103.4
HERC3-203ENST00000407637 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
HERC3-203ENST00000407637 KAT6AQ92794 2004 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 LPXNO60711 386 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 FUCA1P04066 466 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 ZSCAN5DPP0CG00 497 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 KITP10721 976 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 STAT3P40763 770 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 BCAP31P51572 246 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 DHRS4L2Q6PKH6 230 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 DDI1Q8WTU0 396 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 MZB1Q8WU39 189 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 COA7Q96BR5 231 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 TRPV5Q9NQA5 729 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 TRNAU1APQ9NX07 287 aaKnown RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 KCNK4Q9NYG8 393 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 H3BNX3 289 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 EML1O00423 815 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 PEX1O43933 1283 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 MED24O75448 989 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 OCM2P0CE71 109 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 OCMP0CE72 109 aaPredicted RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 RALAP11233 206 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 PHKA2P46019 1235 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 UBE2SQ16763 222 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 EFHC2Q5JST6 749 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 MYPNQ86TC9 1320 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 CHSY1Q86X52 802 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
HERC3-203ENST00000407637 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 PYROXD1Q8WU10 500 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 NEURL2Q9BR09 285 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 POLIQ9UNA4 740 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 MAD1L1Q9Y6D9 718 aa13.38□□□□□ -0.27
HERC3-203ENST00000407637 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 CLCN2P51788 898 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 ADCY7P51828 1080 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 GPX6P59796 221 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 TFDP1Q14186 410 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 COG2Q14746 738 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 TMEM214Q6NUQ4 689 aaKnown RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 JADE3Q92613 823 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 BIRC8Q96P09 236 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 PAFAH2Q99487 392 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 FHDC1Q9C0D6 1143 aaPredicted RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 C1orf21Q9H246 121 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 CYP4F11Q9HBI6 524 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 UBE2TQ9NPD8 197 aaPredicted RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 MEIS1O00470 390 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 DNALI1O14645 258 aaPredicted RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 SGPL1O95470 568 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 DHRS4L1P0CG22 281 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 THRAP10827 490 aa13.37□□□□□ -0.27
HERC3-203ENST00000407637 EIF2B2P49770 351 aaKnown RBP13.37□□□□□ -0.27
HERC3-203ENST00000407637 CDK9P50750 372 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms