RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 COG5Q9UP83 839 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
USF1-203ENST00000368021 CALB1P05937 261 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 TCP1P17987 556 aaKnown RBP12.77□□□□□ -0.37
USF1-203ENST00000368021 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.37
USF1-203ENST00000368021 PTP4A2Q12974 167 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 LCLAT1Q6UWP7 414 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 DAAM2Q86T65 1068 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 CRYBG2Q8N1P7 616 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 C1orf131Q8NDD1 294 aaKnown RBP12.77□□□□□ -0.37
USF1-203ENST00000368021 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
USF1-203ENST00000368021 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 NUP85Q9BW27 656 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 PBX4Q9BYU1 374 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 STXBP5LQ9Y2K9 1186 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 TTC3P53804 2025 aa12.77□□□□□ -0.37
USF1-203ENST00000368021 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.76□□□□□ -0.37
USF1-203ENST00000368021 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 ENPP3O14638 875 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 POMCP01189 267 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
USF1-203ENST00000368021 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
USF1-203ENST00000368021 ORC1Q13415 861 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 WDTC1Q8N5D0 677 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 MRPL47Q9HD33 250 aaKnown RBP12.76□□□□□ -0.37
USF1-203ENST00000368021 SCINQ9Y6U3 715 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 REV3LO60673 3130 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 A0A0C4DFX4 3053 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 A8MXQ7 604 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 CYB561D2O14569 222 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 GABRDO14764 452 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
USF1-203ENST00000368021 MICAL2O94851 1124 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 FTCDO95954 541 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 RRM1P23921 792 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 DNAJB2P25686 324 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 NOMO2Q5JPE7 1267 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 CLLU1OSQ5K130 101 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 ARHGAP17Q68EM7 881 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 MMS22LQ6ZRQ5 1243 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 Q7L0L9 218 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 PEX26Q7Z412 305 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 NT5DC3Q86UY8 548 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 MSANTD4Q8NCY6 345 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 OSBPL9Q96SU4 736 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 C11orf70Q9BRQ4 267 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
USF1-203ENST00000368021 CES2O00748 559 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 AMHP03971 560 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 FGFR1P11362 822 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
USF1-203ENST00000368021 GPD2P43304 727 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 LHX1P48742 406 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 DSC1Q08554 894 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 RPS6KA1Q15418 735 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 SRLQ86TD4 932 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 ERICH1Q86X53 443 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 TSC1Q92574 1164 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 PARVAQ9NVD7 372 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 AMFRQ9UKV5 643 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 PCDHB7Q9Y5E2 793 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 MYO9BQ13459 2157 aa12.75□□□□□ -0.37
USF1-203ENST00000368021 FAM170AA1A519 330 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 M0QYV0 167 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 HOXA2O43364 376 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TLL1O43897 1013 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 EFCAB14O75071 495 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 B3GAT3O94766 335 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 KIF4AO95239 1232 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
USF1-203ENST00000368021 MAMLD1Q13495 774 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms