RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 EBF3Q9H4W6 596 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 PSMC3IPQ9P2W1 217 aaPredicted RBP13.91□□□□□ -0.18
CCDC117-201ENST00000249064 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 MTO1Q9Y2Z2 717 aaKnown RBP13.91□□□□□ -0.18
CCDC117-201ENST00000249064 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 SNHG28P0DPA3 235 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 ENO3P13929 434 aaPredicted RBP13.91□□□□□ -0.18
CCDC117-201ENST00000249064 ATICP31939 592 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
CCDC117-201ENST00000249064 SLC1A5Q15758 541 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 SCYL2Q6P3W7 929 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 VSTM1Q6UX27 236 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 ZCCHC23Q6ZST2 131 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 HSPBAP1Q96EW2 488 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 ATXN7L3BQ96GX2 97 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 WWP1Q9H0M0 922 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 OCEL1Q9H607 264 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 TBC1D23Q9NUY8 699 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
CCDC117-201ENST00000249064 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 MAGEA10P43363 369 aaPredicted RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 NAA20P61599 178 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 TBL3Q12788 808 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ZBTB33Q86T24 672 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 BCL9LQ86UU0 1499 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 HOMEZQ8IX15 550 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 PRKAG3Q9UGI9 489 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 WDR64B1ANS9 1081 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 TBX3O15119 743 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 SLC16A3O15427 465 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 GMNNO75496 209 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ITGA2BP08514 1039 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 PPP3CAQ08209 521 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 AP1B1Q10567 949 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ART3Q13508 389 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ATG16L1Q676U5 607 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ZNF572Q7Z3I7 529 aaPredicted RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 NAT14Q8WUY8 206 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ZDHHC15Q96MV8 337 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 YWHABP31946 246 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 BPIFB4P59827 614 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 JAG1P78504 1218 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 PDK3Q15120 406 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 EIF1ADQ8N9N8 165 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
CCDC117-201ENST00000249064 R3HDM2Q9Y2K5 976 aaKnown RBP13.9□□□□□ -0.18
CCDC117-201ENST00000249064 SPDYE16A6NNV3 312 aaPredicted RBP13.9□□□□□ -0.19
CCDC117-201ENST00000249064 PIK3R2O00459 728 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.19
CCDC117-201ENST00000249064 ETS1P14921 441 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 RAG1P15918 1043 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.19
CCDC117-201ENST00000249064 ARL4CP56559 192 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 INHBEP58166 350 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 GEN1Q17RS7 908 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 PPP6R3Q5H9R7 873 aaPredicted RBP13.9□□□□□ -0.19
CCDC117-201ENST00000249064 SWSAP1Q6NVH7 229 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 ATP2A3Q93084 1043 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 HES6Q96HZ4 224 aa13.9□□□□□ -0.19
CCDC117-201ENST00000249064 POLR3CQ9BUI4 534 aaPredicted RBP13.9□□□□□ -0.19
CCDC117-201ENST00000249064 GJB6O95452 261 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 GM2AP17900 193 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 CAV1Q03135 178 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 OR6Y1Q8NGX8 325 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 GIPC3Q8TF64 312 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 SREK1Q8WXA9 508 aaKnown RBP13.89□□□□□ -0.19
CCDC117-201ENST00000249064 CASP10Q92851 521 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 BOLA2-SMG1P6H3BVE0 249 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 MAP3K6O95382 1288 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 LCA5LO95447 670 aa13.89□□□□□ -0.19
CCDC117-201ENST00000249064 VIL1P09327 827 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms