RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TRIM54Q9BYV2 358 aa18.14■□□□□ 0.49
PTPN21-208ENST00000556564 CTIFO43310 598 aaKnown RBP18.14■□□□□ 0.49
PTPN21-208ENST00000556564 CST8O60676 142 aa18.14■□□□□ 0.49
PTPN21-208ENST00000556564 DHX34Q14147 1143 aaKnown RBP18.14■□□□□ 0.49
PTPN21-208ENST00000556564 MTHFD1LQ6UB35 978 aa18.14■□□□□ 0.49
PTPN21-208ENST00000556564 TATDN2Q93075 761 aa18.14■□□□□ 0.49
PTPN21-208ENST00000556564 MLXIPLQ9NP71 852 aa18.14■□□□□ 0.49
PTPN21-208ENST00000556564 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.14■□□□□ 0.49
PTPN21-208ENST00000556564 SLC2A3P11169 496 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 CYP11B1P15538 503 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 SMARCAL1Q9NZC9 954 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 SLC25A13Q9UJS0 675 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 PCDHB5Q9Y5E4 795 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 SPDYE5A6NIY4 337 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 KPNA7A9QM74 516 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 PHF2O75151 1096 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ELAVL2Q12926 359 aaKnown RBP18.13■□□□□ 0.49
PTPN21-208ENST00000556564 WDR24Q96S15 920 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 GPATCH2LQ9NWQ4 482 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 HPSEQ9Y251 543 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ACKR2O00590 384 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 TKTL1P51854 596 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 TSSK1BQ9BXA7 367 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 GPR63Q9BZJ6 419 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 CFLARO15519 480 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ZNF189O75820 626 aaPredicted RBP18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ASS1P00966 412 aaKnown RBP18.13■□□□□ 0.49
PTPN21-208ENST00000556564 HOXC6P09630 235 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 MAPTP10636 758 aaKnown RBP18.13■□□□□ 0.49
PTPN21-208ENST00000556564 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 CDR2Q01850 454 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ART3Q13508 389 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 RAB42Q8N4Z0 105 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 TC2NQ8N9U0 490 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ADAM33Q9BZ11 813 aa18.13■□□□□ 0.49
PTPN21-208ENST00000556564 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 NDST1P52848 882 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 LBRQ14739 615 aaKnown RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 KIAA0895Q8NCT3 520 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SLC30A1Q9Y6M5 507 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ATRNO75882 1429 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 CCDC151A5D8V7 595 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 GNGT2O14610 69 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 TLR2O60603 784 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SLC39A12Q504Y0 691 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ELMO2Q96JJ3 720 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ERGIC2Q96RQ1 377 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 GAD1Q99259 594 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 OSBPL8Q9BZF1 889 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 MSRAQ9UJ68 235 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 MAPK13O15264 365 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SPAG7O75391 227 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 MAP3K6O95382 1288 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 PDAP1Q13442 181 aaKnown RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 RABGAP1LQ5R372 815 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 RAD9BQ6WBX8 426 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SDCCAG3Q96C92 435 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ZFATQ9P243 1243 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 FRMPD4Q14CM0 1322 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ANKRD63C9JTQ0 380 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 TYK2P29597 1187 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 MTM1Q13496 603 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 TACO1Q9BSH4 297 aaKnown RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 OLFML3Q9NRN5 406 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 KIAA1257Q9ULG3 409 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SNX12Q9UMY4 172 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 UBIAD1Q9Y5Z9 338 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SERPIND1P05546 499 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 MAP4P27816 1152 aaKnown RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 BYSLQ13895 437 aaKnown RBP18.12■□□□□ 0.49
PTPN21-208ENST00000556564 SPARCL1Q14515 664 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 TTI2Q6NXR4 508 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 ZBTB18Q99592 522 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
PTPN21-208ENST00000556564 KCNT1Q5JUK3 1230 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 SV2AQ7L0J3 742 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TSPYL2Q9H2G4 693 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TLR8Q9NR97 1041 aaKnown RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 ALG6Q9Y672 507 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 RECQL4O94761 1208 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 SCNN1GP51170 649 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PPM1LQ5SGD2 360 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 FAM71DQ8N9W8 422 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 FAM172AQ8WUF8 416 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 EDEM1Q92611 657 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 YIPF2Q9BWQ6 316 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 ATXN3LQ9H3M9 355 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 SMIM24O75264 130 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 NDUFS3O75489 264 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 BST2Q10589 180 aaKnown RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 ST3GAL1Q11201 340 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 FAM133BQ5BKY9 247 aaKnown RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TBC1D1Q86TI0 1168 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PALB2Q86YC2 1186 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TFB1MQ8WVM0 346 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms