RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 AGPAT1Q99943 283 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 NXF1Q9UBU9 619 aaKnown RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 SALL4Q9UJQ4 1053 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 MYBPHLA2RUH7 354 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 TULP2O00295 520 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 PHACTR2O75167 634 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 B3GAT3O94766 335 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 EIF4A3P38919 411 aaKnown RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 OR1G1P47890 313 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 COL19A1Q14993 1142 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 DENND1BQ6P3S1 775 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 LILRA6Q6PI73 481 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 TMEM270Q6UE05 265 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 TDHQ8IZJ6 230 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 KLHL23Q8NBE8 558 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 CPLX3Q8WVH0 158 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 ZNF830Q96NB3 372 aaPredicted RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
LINC00517-202ENST00000554257 FNIP2Q9P278 1114 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 DSEQ9UL01 958 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 CDH9Q9ULB4 789 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 FAN1Q9Y2M0 1017 aa7.2□□□□□ -1.26
LINC00517-202ENST00000554257 BTNL10A8MVZ5 291 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 FGF18O76093 207 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 MICAL2O94851 1124 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ALDH2P05091 517 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 SMAD3P84022 425 aaKnown RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 EIF4EBP2Q13542 120 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 RAPGEF1Q13905 1077 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 CNGA2Q16280 664 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ASIC2Q16515 512 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 SLC18A3Q16572 532 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 DNAAF5Q86Y56 855 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 GPIHBP1Q8IV16 184 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 MYCBPAPQ8TBZ2 947 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 RNPC3Q96LT9 517 aaKnown RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 SMOQ99835 787 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 BAG1Q99933 345 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 TJP2Q9UDY2 1190 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 TIMM13Q9Y5L4 95 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 MIA3Q5JRA6 1907 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 A0A1W2PPC1 479 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 FAM92AA1XBS5 289 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 H3BNC9 293 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 NRG2O14511 850 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 C1RP00736 705 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 CA3P07451 260 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 CTSAP10619 480 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 VDRP11473 427 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 PTPN1P18031 435 aaKnown RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 CD58P19256 250 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 GNL1P36915 607 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 LHX1P48742 406 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ERVFC1P60507 584 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 TNNC1P63316 161 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 BTG3Q14201 252 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 LRIT3Q3SXY7 679 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 TRNP1Q6NT89 227 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 PHF13Q86YI8 300 aaPredicted RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 CCDC170Q8IYT3 715 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 TTC39CQ8N584 583 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 FEZF2Q8TBJ5 459 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 PCED1BQ96HM7 432 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ZNF558Q96NG5 402 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 COLEC11Q9BWP8 271 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 RHOBTB2Q9BYZ6 727 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ADAM33Q9BZ11 813 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 DDX43Q9NXZ2 648 aaKnown RBP7.19□□□□□ -1.26
LINC00517-202ENST00000554257 PCDHB4Q9Y5E5 795 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 ADGRG1Q9Y653 693 aa7.19□□□□□ -1.26
LINC00517-202ENST00000554257 WDR27A2RRH5 827 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 USP27XA6NNY8 438 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 CCDC130P13994 396 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 ACAT1P24752 427 aaKnown RBP7.18□□□□□ -1.26
LINC00517-202ENST00000554257 PLA2G4AP47712 749 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 KIF11P52732 1056 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 GFPT1Q06210 699 aaPredicted RBP7.18□□□□□ -1.26
LINC00517-202ENST00000554257 PRSS55Q6UWB4 352 aaPredicted RBP7.18□□□□□ -1.26
LINC00517-202ENST00000554257 CYP26C1Q6V0L0 522 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 CLEC20AQ6ZU45 233 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 GPRIN1Q7Z2K8 1008 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 ACOT1Q86TX2 421 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 SCML4Q8N228 414 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 TTC9BQ8N6N2 239 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 KIAA1524Q8TCG1 905 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 SLC22A17Q8WUG5 538 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 C11orf84Q9BUA3 381 aaPredicted RBP7.18□□□□□ -1.26
LINC00517-202ENST00000554257 NT5C1AQ9BXI3 368 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 SLC4A5Q9BY07 1137 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 PACSIN1Q9BY11 444 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 UBXN6Q9BZV1 441 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 SPG21Q9NZD8 308 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
LINC00517-202ENST00000554257 TFR2Q9UP52 801 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms