RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PIGFQ07326 219 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 ODF1Q14990 250 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 RBBP5Q15291 538 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 PGS1Q32NB8 556 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 FAM102AQ5T9C2 384 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CCDC30Q5VVM6 783 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 MAPKAPK5Q8IW41 473 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 COLGALT2Q8IYK4 626 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 PROKR1Q8TCW9 393 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 MORC4Q8TE76 937 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 NSUN6Q8TEA1 469 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 C17orf50Q8WW18 174 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZBTB9Q96C00 473 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CLIP3Q96DZ5 547 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 LZTS2Q9BRK4 669 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 GSTO2Q9H4Y5 243 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 MMRN2Q9H8L6 949 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CYP4F11Q9HBI6 524 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 METTL14Q9HCE5 456 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 RLIMQ9NVW2 624 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 JKAMPQ9P055 326 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CFAP97Q9P2B7 532 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHPF2Q9P2E5 772 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CPSF2Q9P2I0 782 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 C11orf21Q9P2W6 132 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 SUN2Q9UH99 717 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZNF180Q9UJW8 692 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 MTO1Q9Y2Z2 717 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHST2Q9Y4C5 530 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 TONSLQ96HA7 1378 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 REREQ9P2R6 1566 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 ATP7AQ04656 1500 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZMYM4Q5VZL5 1548 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 LMTK2Q8IWU2 1503 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 KDM5DQ9BY66 1539 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 GRM6O15303 877 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 NARSO43776 548 aaKnown RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 KINO60870 393 aaKnown RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 HMMRO75330 724 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 GPANK1O95872 356 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 PF4V1P10720 104 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 DDX6P26196 483 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 TGFB2P61812 414 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 DGCR2P98153 550 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZNF844Q08AG5 666 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 IL10RAQ13651 578 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 GTF2H3Q13889 308 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 C3orf36Q3SXR2 165 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 UBE3BQ7Z3V4 1068 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 JDP2Q8WYK2 163 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 ANKRD7Q92527 254 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 DDX17Q92841 729 aaKnown RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 TNPO1Q92973 898 aaKnown RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 RGMAQ96B86 450 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 MRGPRX4Q96LA9 322 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 MMTAG2Q9BU76 263 aaKnown RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 POLR3CQ9BUI4 534 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 NMRK2Q9NPI5 230 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 SLC2A4RGQ9NR83 387 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 CNNM1Q9NRU3 951 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 KCNE5Q9UJ90 142 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 EID1Q9Y6B2 187 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 MORC2Q9Y6X9 1032 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 PLXNC1O60486 1568 aa5.24□□□□□ -1.57
HMGB3P13-201ENST00000511263 PNPLA7Q6ZV29 1317 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 A0A1B0GTW7 788 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TMEM200CA6NKL6 621 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 AHRRA9YTQ3 701 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SH3BP5O60239 455 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 RFPL1O75677 317 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NCR1O76036 304 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CDKL5O76039 1030 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ABLIM3O94929 683 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NDUFA10O95299 355 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 FTLP02792 175 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CFIP05156 583 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CD1AP06126 327 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NBPF7P0C2Y1 421 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TNNT1P13805 278 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 EDNRBP24530 442 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 USP14P54578 494 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 INHBCP55103 352 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 RHBDL3P58872 404 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NUCB2P80303 420 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SLC25A3Q00325 362 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TLE1Q04724 770 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 MCL1Q07820 350 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZRSR1Q15695 479 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 BEAN1Q3B7T3 259 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 PDCD4Q53EL6 469 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SLC4A10Q6U841 1118 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 LEKR1Q6ZMV7 388 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 PDSS2Q86YH6 399 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ARHGEF19Q8IW93 802 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 LCORLQ8N3X6 602 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 PRR18Q8N4B5 295 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZGPATQ8N5A5 531 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms