RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CDHR3Q6ZTQ4 885 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 LPCAT2Q7L5N7 544 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CLVS1Q8IUQ0 354 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 REM2Q8IYK8 340 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 SLC4A11Q8NBS3 891 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 GPR101Q96P66 508 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 HAUS8Q9BT25 410 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 TLE6Q9H808 572 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ZNF287Q9HBT7 754 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 ATAD3AQ9NVI7 634 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 PARP2Q9UGN5 583 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 CDC14AQ9UNH5 594 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 TELO2Q9Y4R8 837 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
LIMCH1-207ENST00000508466 F5H423 210 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 SPECC1L-ADORA2AF8WAN1 911 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CES2O00748 559 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ATP9BO43861 1147 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ABCB7O75027 752 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 MAGP20916 626 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PKNOX1P55347 436 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 MRPS22P82650 360 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CDK16Q00536 496 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 BNIP3Q12983 259 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GPS1Q13098 491 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 EGFLAMQ63HQ2 1017 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 VASH1Q7L8A9 365 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 SLC47A2Q86VL8 602 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ZNF384Q8TF68 577 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 C7orf43Q8WVR3 580 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DHX38Q92620 1227 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 HPS1Q92902 700 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 SLC35C1Q96A29 364 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CCT7Q99832 543 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 HERC2P3Q9BVR0 1158 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 KCTD10Q9H3F6 313 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TPK1Q9H3S4 243 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ARHGAP26Q9UNA1 814 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DTNAQ9Y4J8 743 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ST14Q9Y5Y6 855 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 NWD1Q149M9 1564 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 A0A088AWK7 358 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TRAFD1O14545 582 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CRTAMO95727 393 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 LDHCP07864 332 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DLDP09622 509 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 MYCLP1P12525 358 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 P4HA1P13674 534 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TCF4P15884 667 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 IL6STP40189 918 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DRG2P55039 364 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PHEXP78562 749 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 IKQ13123 557 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 BMPR2Q13873 1038 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CCNIQ14094 377 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ANKRD20A4Q4UJ75 823 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CMPK2Q5EBM0 449 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 C11orf63Q6NUN7 778 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DEFB107AQ8IZN7 70 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 OLIG1Q8TAK6 271 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 FAM172AQ8WUF8 416 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TEKT1Q969V4 418 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TSPAN18Q96SJ8 248 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GPATCH1Q9BRR8 931 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TMEM109Q9BVC6 243 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 NAA50Q9GZZ1 169 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 RIC8AQ9NPQ8 531 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 FAIMQ9NVQ4 179 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 MAD2L2Q9UI95 211 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PLA2G4CQ9UP65 541 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DIP2AQ14689 1571 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ECM29Q5VYK3 1845 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 PNPLA7Q6ZV29 1317 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GOLGA8IPA6NC78 632 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GOLGA8JA6NMD2 632 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L15C9J2P7 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L13C9JLJ4 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L11C9JVI0 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L18D6R9N7 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L22D6RA61 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L17D6RBQ6 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L19D6RCP7 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L20D6RJB6 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 STX16-NPEPL1H3BU86 382 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CHMP2AO43633 222 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 KLHL41O60662 606 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 DNAJA2O60884 412 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 AVILO75366 819 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 KCNH1O95259 989 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CLIC3O95833 236 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 NR3C1P04150 777 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 TMEM253P0C7T8 217 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 CDH2P19022 906 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 ALDH1A3P47895 512 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 GCLMP48507 274 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 RPS6P62753 249 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 USP17L24Q0WX57 530 aa7.6□□□□□ -1.19
LIMCH1-207ENST00000508466 FSTL1Q12841 308 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms