RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 SSH3Q8TE77 659 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 PHKBQ93100 1093 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 COQ10AQ96MF6 247 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 PRRX2Q99811 253 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 ZNF287Q9HBT7 754 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 COL20A1Q9P218 1284 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 HS3ST3A1Q9Y663 406 aa7.27□□□□□ -1.25
UBE2D3-217ENST00000504211 A0A0B4J269 797 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 MBD3L4A6NDZ8 208 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 MBD3L3A6NE82 208 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 FOXN3O00409 490 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 PMM2O15305 246 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 PROM1O43490 865 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 TUBB3Q13509 450 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 Q6YL49 198 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 USP51Q70EK9 711 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 NOL8Q76FK4 1167 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 C11orf96Q7Z7L8 435 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 GAS2L3Q86XJ1 694 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 SLC15A4Q8N697 577 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 FBXO41Q8TF61 875 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 MESP1Q9BRJ9 268 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 TTYH3Q9C0H2 523 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 KCTD5Q9NXV2 234 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 FAM50BQ9Y247 325 aa7.26□□□□□ -1.25
UBE2D3-217ENST00000504211 MYO1CO00159 1063 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 MAP4K4O95819 1239 aaPredicted RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 HKR1P10072 659 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 XRCC6P12956 609 aaKnown RBP eCLIP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 NEU4Q8WWR8 484 aaPredicted RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 PTCD3Q96EY7 689 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 Q96MF0 132 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 APOL5Q9BWW9 433 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 A1CFQ9NQ94 594 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 SACM1LQ9NTJ5 587 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 TESQ9UGI8 421 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 COL4A3Q01955 1670 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 MAST3O60307 1309 aa7.25□□□□□ -1.25
UBE2D3-217ENST00000504211 TRIAP1O43715 76 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 KRT4P19013 534 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 KLRC1P26715 233 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 PPIFP30405 207 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 GDF5P43026 501 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 RBM20Q5T481 1227 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 DCAF12L1Q5VU92 463 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 VWA1Q6PCB0 445 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 VRK3Q8IV63 474 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 LCORLQ8N3X6 602 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 OR56A3Q8NH54 315 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 UNKQ9C0B0 810 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 SHOC2Q9UQ13 582 aa7.24□□□□□ -1.25
UBE2D3-217ENST00000504211 TMEM233B4DJY2 109 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 F5H697 171 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 CYR61O00622 381 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 PPP3CBP16298 524 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 CD6P30203 668 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 AVPR1BP47901 424 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 PXNP49023 591 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 LILRA4P59901 499 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 RPS16P62249 146 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 SF3B3Q15393 1217 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 MAP9Q49MG5 647 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 C3orf38Q5JPI3 329 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 SFRP4Q6FHJ7 346 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 LAYNQ6UX15 382 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 TMEM108Q6UXF1 575 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 CCDC146Q8IYE0 955 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 LPIN2Q92539 896 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 ZC3H10Q96K80 434 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 STRBPQ96SI9 672 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 NELL2Q99435 816 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 MS4A7Q9GZW8 240 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 DMTF1Q9Y222 760 aa7.23□□□□□ -1.25
UBE2D3-217ENST00000504211 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 PEG3Q9GZU2 1588 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 TMEM191CA6NGB0 347 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 PYCARD-AS1I3L0S3 204 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 LRPAP1P30533 357 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 PIK3CBP42338 1070 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 ITIH3Q06033 890 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 KLF10Q13118 480 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 KIAA0895LQ68EN5 471 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 LDLRAD3Q86YD5 345 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 MPP5Q8N3R9 675 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 BEND2Q8NDZ0 799 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 AIFM2Q9BRQ8 373 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 PTDSS2Q9BVG9 487 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 NAA15Q9BXJ9 866 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 AMBRA1Q9C0C7 1298 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 SCAND2PQ9GZW5 306 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 PCED1AQ9H1Q7 454 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
UBE2D3-217ENST00000504211 CASS4Q9NQ75 786 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms