RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 INPP4AQ96PE3 977 aaPredicted RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PURBQ96QR8 312 aaKnown RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 FUT8Q9BYC5 575 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 APOBEC2Q9Y235 224 aaKnown RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PRG3Q9Y2Y8 225 aaPredicted RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 TISP43B9A030 160 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 CYB561D2O14569 222 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 SLC29A2Q14542 456 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PPIL6Q8IXY8 311 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 ASAP3Q8TDY4 903 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 SOCS4Q8WXH5 440 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PABPC3Q9H361 631 aaKnown RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 KCTD10Q9H3F6 313 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 RRAGCQ9HB90 399 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PSMC3IPQ9P2W1 217 aaPredicted RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 USP20Q9Y2K6 914 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 ROBO1Q9Y6N7 1651 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 AP1G2O75843 785 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 LGALS2P05162 132 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 ACO1P21399 889 aaKnown RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 SESN3P58005 492 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 MTHFD1LQ6UB35 978 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 TRIM67Q6ZTA4 783 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 ATPAF2Q8N5M1 289 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 BARX2Q9UMQ3 279 aaPredicted RBP14.43□□□□□ -0.1
BRAT1-203ENST00000467558 SPAG7O75391 227 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 AKR1A1P14550 325 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ADCYAP1R1P41586 468 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 RTP1P59025 263 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ECM1Q16610 540 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 TLK2Q86UE8 772 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SGSM3Q96HU1 749 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 LRRC37BQ96QE4 947 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 GLRA2P23416 452 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 NNMTP40261 264 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SNX17Q15036 470 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 PDK2Q15119 407 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ARSHQ5FYA8 562 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SH2D4BQ5SQS7 431 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 POTEAQ6S8J7 498 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 C3orf62Q6ZUJ4 267 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 RASSF3Q86WH2 238 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ADGRF2Q8IZF7 708 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 FGFR1OP2Q9NVK5 253 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 EPS15L1Q9UBC2 864 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 KLRG2A4D1S0 409 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SETSIPP0DME0 302 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 HSD17B3P37058 310 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ITGB3BPQ13352 177 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 DNAAF5Q86Y56 855 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 FAM71DQ8N9W8 422 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF512Q96ME7 567 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 CATSPERBQ9H7T0 1116 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 DDIT4Q9NX09 232 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 CES2O00748 559 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 F9P00740 461 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF200P98182 395 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SYCP2LQ5T4T6 812 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 RIBC1Q8N443 379 aaPredicted RBP14.42□□□□□ -0.1
BRAT1-203ENST00000467558 DNAJB3Q8WWF6 145 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ATG4AQ8WYN0 398 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 PPP1R2P1Q96PQ5 205 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SLITRK1Q96PX8 696 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 SNTG2Q9NY99 539 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 CHMP2BQ9UQN3 213 aa14.42□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 M0QYT0 321 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 UPP2O95045 317 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 AXLP30530 894 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 RAD51Q06609 339 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 KCNMA1Q12791 1236 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 MGAT5BQ3V5L5 792 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 ARRDC4Q8NCT1 418 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 CAMKK2Q96RR4 588 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 TINF2Q9BSI4 451 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 AVENQ9NQS1 362 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 G3BP2Q9UN86 482 aaKnown RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 RAP1GAPP47736 663 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 SERPINB9P50453 376 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 NPY5RQ15761 445 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 TBC1D1Q86TI0 1168 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 SH3TC2Q8TF17 1288 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 LRGUKQ96M69 825 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 DCTN4Q9UJW0 460 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 LHX1P48742 406 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 ARFIP2P53365 341 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 DRP2Q13474 957 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 UGP2Q16851 508 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 EXT2Q93063 718 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 SEPT5Q99719 369 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 EPN3Q9H201 632 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms