RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 P4HA1P13674 534 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 CCNFP41002 786 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 DMP1Q13316 513 aaPredicted RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 TMOD3Q9NYL9 352 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 TTLL13PA6NNM8 815 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 SNAP91O60641 907 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 SNX2O60749 519 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 SARSP49591 514 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 DYNLT1P63172 113 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 DPYSQ14117 519 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 C12orf60Q5U649 245 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ABRAXAS1Q6UWZ7 409 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 CCDC33Q8N5R6 958 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 NEDD1Q8NHV4 660 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 SEMA4AQ9H3S1 761 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ZNF277Q9NRM2 450 aaPredicted RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 FCHO1O14526 889 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 MTSS1O43312 755 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 TSC22D2O75157 780 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 LGR5O75473 907 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 UCHL3P15374 230 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 DRAP1Q14919 205 aaPredicted RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ZNF423Q2M1K9 1284 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 RUNDC3AQ59EK9 446 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 C6orf89Q6UWU4 347 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 PHF21AQ96BD5 680 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ACAT2Q9BWD1 397 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 UBE2OQ9C0C9 1292 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 CCSER1Q9C0I3 900 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 STN1Q9H668 368 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ANKRD33BA6NCL7 494 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 TUFMP49411 452 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 HSPA2P54652 639 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 ARHGEF19Q8IW93 802 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 TDRD5Q8NAT2 981 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 NSMCE3Q96MG7 304 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 DENND2DQ9H6A0 471 aaPredicted RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 MOSPD1Q9UJG1 213 aa6.73□□□□□ -1.33
SBNO1-202ENST00000420886 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
SBNO1-202ENST00000420886 SETD1AO15047 1707 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 ZNF609O15014 1411 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 HTR3EA5X5Y0 456 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SLC26A4O43511 780 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 ABCE1P61221 599 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 NEDD8Q15843 81 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RBM20Q5T481 1227 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 EGFLAMQ63HQ2 1017 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CCSAPQ6IQ19 270 aaPredicted RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TTC30BQ8N4P2 665 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SNX31Q8N9S9 440 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 DHX38Q92620 1227 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TRIM9Q9C026 710 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 VPS11Q9H270 941 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CNOT8Q9UFF9 292 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 NAGPAQ9UK23 515 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CCDC78A2IDD5 438 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SNPHO15079 494 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SLC16A3O15427 465 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RGS5O15539 181 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TRPV5Q9NQA5 729 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 IP6K2Q9UHH9 426 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 ZNF862O60290 1169 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CALB1P05937 261 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 PABPC4LP0CB38 370 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TCN1P20061 433 aaPredicted RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 EIF4A1P60842 406 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TAP1Q03518 808 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TRIM72Q6ZMU5 477 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TRIM69Q86WT6 500 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 ALLCQ8N6M5 410 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 C19orf18Q8NEA5 215 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 FRMD8Q9BZ67 464 aaPredicted RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CCDC182A6NF36 153 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TMEM114B3SHH9 223 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SIN3BO75182 1162 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 ZBTB11O95625 1053 aaPredicted RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 NR3C1P04150 777 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RIPPLY1Q0D2K3 151 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TJAP1Q5JTD0 557 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SYDE2Q5VT97 1194 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CCDC149Q6ZUS6 474 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 CYB5R4Q7L1T6 521 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RCOR2Q8IZ40 523 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 NCLNQ969V3 563 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 EYA1Q99502 592 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 DCDC2Q9UHG0 476 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 RNMTO43148 476 aaKnown RBP6.72□□□□□ -1.33
SBNO1-202ENST00000420886 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 COASYQ13057 564 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 PNMA1Q8ND90 353 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 PLEKHO2Q8TD55 490 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 FAM111AQ96PZ2 611 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 SYT15Q9BQS2 421 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
SBNO1-202ENST00000420886 GTSE1Q9NYZ3 720 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms