RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SLC7A1P30825 629 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 FOLR3P41439 243 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 PTH2RP49190 550 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 MAPK10P53779 464 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 ZNF169Q14929 603 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 TXNRD1Q16881 649 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 ZIK1Q3SY52 487 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 LONRF3Q496Y0 759 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 ZNF280BQ86YH2 543 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 OSBPL9Q96SU4 736 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 CNNM1Q9NRU3 951 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 XPR1Q9UBH6 696 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 SSX2IPQ9Y2D8 614 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 TBC1D30Q9Y2I9 924 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 ARHGEF17Q96PE2 2063 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 CFAP69A5D8W1 941 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 BTN3A1O00481 513 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 ZBED1O96006 694 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 RHCEP18577 417 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 ITGALP20701 1170 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 RHDQ02161 417 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 CCDC149Q6ZUS6 474 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 PEG10Q86TG7 708 aaKnown RBP5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 SLC15A4Q8N697 577 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 DNAJC5GQ8N7S2 189 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 FBXL20Q96IG2 436 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 ACTRT3Q9BYD9 372 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 FAM204AQ9H8W3 233 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 DKK3Q9UBP4 350 aa5.59□□□□□ -1.51
HMGB1P49-201ENST00000418882 KAT6AQ92794 2004 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 GOLGA6CA6NDK9 693 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 GOLGA6BA6NDN3 693 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 hCG_1984214I3L0E3 225 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 PEX1O43933 1283 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 HRGP04196 525 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 GOLGA6DP0CG33 693 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 PCSK6P29122 969 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 CD6P30203 668 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 VIPR2P41587 438 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 SUMO3P55854 103 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 PRR16Q569H4 304 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 ZNF362Q5T0B9 420 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 RNF220Q5VTB9 566 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 ZNF783Q6ZMS7 281 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 MICU3Q86XE3 530 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 B3GALNT2Q8NCR0 500 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 SIMC1Q8NDZ2 872 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 MESP1Q9BRJ9 268 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 TPSD1Q9BZJ3 242 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 GOLGA6AQ9NYA3 693 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 DMTF1Q9Y222 760 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 MRPS17Q9Y2R5 130 aaKnown RBP5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 PCDHGB6Q9Y5F9 930 aa5.58□□□□□ -1.52
HMGB1P49-201ENST00000418882 PPM1DO15297 605 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 MPPED1O15442 326 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 FRS3O43559 492 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 RHOBTB3O94955 611 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 ATXN1LP0C7T5 689 aaKnown RBP5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 CXCR5P32302 372 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 LOXL3P58215 753 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 SLC13A2Q13183 592 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 IQCB1Q15051 598 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 KIAA0753Q2KHM9 967 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 DCAF12L1Q5VU92 463 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 MAVSQ7Z434 540 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 SRGAP1Q7Z6B7 1085 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 DGKHQ86XP1 1220 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 OR6B3Q8NGW1 331 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 LRTOMTQ8WZ04 291 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 RFKQ969G6 155 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 SLITRK6Q9H5Y7 841 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 PRDM11Q9NQV5 511 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 TMX2Q9Y320 296 aa5.57□□□□□ -1.52
HMGB1P49-201ENST00000418882 TRIAP1O43715 76 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 SOAT2O75908 522 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 THP07101 528 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 MYF5P13349 255 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 BMP5P22003 454 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 PEX2P28328 305 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 PXNP49023 591 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 RARRES1P49788 294 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 ITIH3Q06033 890 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 EIF2B5Q13144 721 aaKnown RBP5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 SEMA5AQ13591 1074 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 PTPRRQ15256 657 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 C3orf38Q5JPI3 329 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 ARHGAP40Q5TG30 622 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 ZDHHC24Q6UX98 284 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 SESTD1Q86VW0 696 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 FAM98AQ8NCA5 519 aaKnown RBP5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 RAPGEF4Q8WZA2 1011 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 APOL5Q9BWW9 433 aa5.56□□□□□ -1.52
HMGB1P49-201ENST00000418882 CXorf36Q9H7Y0 433 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms