RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 RPL17P18621 184 aaKnown RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 IGFBP4P22692 258 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 GNA15P30679 374 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 OR1D2P34982 312 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 PBX1P40424 430 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 CDR1P51861 262 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 ADKP55263 362 aaKnown RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 DSG1Q02413 1049 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 NFE2Q16621 373 aaPredicted RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 TDRD12Q587J7 1177 aaKnown RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 FIGNQ5HY92 759 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 MDH1BQ5I0G3 518 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 TAF3Q5VWG9 929 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 PDE12Q6L8Q7 609 aaKnown RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 C4orf50Q6ZRC1 276 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 SPRED2Q7Z698 418 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 OSTM1Q86WC4 334 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 B3GALNT2Q8NCR0 500 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 KBTBD7Q8WVZ9 684 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 ACBD6Q9BR61 282 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 PRO3102Q9H379 93 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 FAM124BQ9H5Z6 455 aaPredicted RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 ABI2Q9NYB9 513 aaPredicted RBP9.5□□□□□ -0.89
BRCC3-206ENST00000399042 IMPACTQ9P2X3 320 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 FBXL5Q9UKA1 691 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 KIAA1257Q9ULG3 409 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 CEP83Q9Y592 693 aa9.5□□□□□ -0.89
BRCC3-206ENST00000399042 RFXAPO00287 272 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PRRG1O14668 218 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 HCRTO43612 131 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GYPCP04921 128 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PAEPP09466 180 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 OR4Q2P0C623 313 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 VDRP11473 427 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 ADORA2BP29275 332 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 NDUFV1P49821 464 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GSDMDP57764 484 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 ERVFC1P60507 584 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GOLGA8FQ08AF8 430 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GOLGA8DPQ0D2H9 430 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 KLHL30Q0D2K2 578 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 INCA1Q0VD86 236 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 TAF12Q16514 161 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 KIAA0319Q5VV43 1072 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 EP400NLQ6ZTU2 488 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 RBM23Q86U06 439 aaKnown RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PALB2Q86YC2 1186 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 MICALL1Q8N3F8 863 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 LNX1Q8TBB1 728 aaPredicted RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 SHC3Q92529 594 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 CYFIP2Q96F07 1278 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 FAM161BQ96MY7 647 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PGLYRP2Q96PD5 576 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 VN1R3Q9BXE9 311 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 ELOVL4Q9GZR5 314 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 LMAN2LQ9H0V9 348 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 ZBP1Q9H171 429 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 DPEP3Q9H4B8 488 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 IGFLR1Q9H665 355 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 TLE6Q9H808 572 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 HMGXB4Q9UGU5 601 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 AJAP1Q9UKB5 411 aaPredicted RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 GTF3C4Q9UKN8 822 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 MYO6Q9UM54 1294 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 PCDHB5Q9Y5E4 795 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 BACE2Q9Y5Z0 518 aa9.49□□□□□ -0.89
BRCC3-206ENST00000399042 BZW2Q9Y6E2 419 aaKnown RBP9.49□□□□□ -0.89
BRCC3-206ENST00000399042 MYBPHLA2RUH7 354 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 GABRDO14764 452 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 TEX28O15482 410 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 MFAP3LO75121 409 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 ATP2C2O75185 946 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 IPO7O95373 1038 aaKnown RBP9.48□□□□□ -0.89
BRCC3-206ENST00000399042 SKILP12757 684 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 ACO1P21399 889 aaKnown RBP9.48□□□□□ -0.89
BRCC3-206ENST00000399042 TNFAIP3P21580 790 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 BRD2P25440 801 aaKnown RBP9.48□□□□□ -0.89
BRCC3-206ENST00000399042 ANXA13P27216 316 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 SSTR3P32745 418 aaPredicted RBP9.48□□□□□ -0.89
BRCC3-206ENST00000399042 GRIK1P39086 918 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 FXR1P51114 621 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRCC3-206ENST00000399042 RAD23BP54727 409 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 SMARCB1Q12824 385 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 STILQ15468 1287 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 PTPN14Q15678 1187 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 GOLGA7BQ2TAP0 167 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 MGAT5BQ3V5L5 792 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 CCDC186Q7Z3E2 898 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 SLC47A2Q86VL8 602 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 SCN4BQ8IWT1 228 aa9.48□□□□□ -0.89
BRCC3-206ENST00000399042 FAM71AQ8IYT1 594 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms