RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RAD51CO43502 376 aa20.56■□□□□ 0.88
PCDH8-202ENST00000377942 IFNA8P32881 189 aa20.56■□□□□ 0.88
PCDH8-202ENST00000377942 LINC00523Q86TU6 105 aa20.56■□□□□ 0.88
PCDH8-202ENST00000377942 CYP3A7-CYP3A51PA0A087WV96 503 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 MYO1DO94832 1006 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 POLBP06746 335 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 CYP3A7P24462 503 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 FDFT1P37268 417 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 ZNF200P98182 395 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 BEND6Q5SZJ8 279 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PPIL6Q8IXY8 311 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 SHCBP1Q8NEM2 672 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PTPRN2Q92932 1015 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 BTBD6Q96KE9 485 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 INTS13Q9NVM9 706 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 GYG2O15488 501 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 ANXA9O76027 345 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 YY1P25490 414 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 SPRP35270 261 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PSEN2P49810 448 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 GTF2H3Q13889 308 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 TBCCQ15814 346 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 SMTNL2Q2TAL5 461 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 BLOC1S4Q9NUP1 217 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PLA2G6O60733 806 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 CCDC22O60826 627 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PLEKP08567 350 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 PBXIP1Q96AQ6 731 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 LRRC37BQ96QE4 947 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 ARHGEF38Q9NXL2 777 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 NDUFS3O75489 264 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 ESRRBO95718 433 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 TAL1P17542 331 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 MCL1Q07820 350 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
PCDH8-202ENST00000377942 CNPY3Q9BT09 278 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 XPNPEP3Q9NQH7 507 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
PCDH8-202ENST00000377942 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 CXCL8P10145 99 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 TMEM132BQ14DG7 1078 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 TFB1MQ8WVM0 346 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 CCDC124Q96CT7 223 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 DDX5P17844 614 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 IL1RL1Q01638 556 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 RNF135Q8IUD6 432 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 USP13Q92995 863 aaPredicted RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 SH3KBP1Q96B97 665 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 C9orf72Q96LT7 481 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 NDE1Q9NXR1 346 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 L3MBTL1Q9Y468 752 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 LMNAP02545 664 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 URODP06132 367 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 GCNT1Q02742 428 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 CCDC15Q0P6D6 951 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 ARHGEF7Q14155 803 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 MAP4K3Q8IVH8 894 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 POP1Q99575 1024 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 GOLPH3Q9H4A6 298 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 CYP39A1Q9NYL5 469 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 MAGEA4P43358 317 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 REXO1L1PQ8IX06 675 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 DNAJB3Q8WWF6 145 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 MRPS31Q92665 395 aaKnown RBP20.54■□□□□ 0.88
PCDH8-202ENST00000377942 FBXO32Q969P5 355 aa20.54■□□□□ 0.88
PCDH8-202ENST00000377942 EML1O00423 815 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 DIAPH2O60879 1101 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 IRF1P10914 325 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 BST2Q10589 180 aaKnown RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 AMHR2Q16671 573 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 SLC15A5A6NIM6 579 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 FGRP09769 529 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 NAA30Q147X3 362 aaPredicted RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 MAPRE2Q15555 327 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 KDELC2Q7Z4H8 507 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 SGSM3Q96HU1 749 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 MLXIPLQ9NP71 852 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 BARX2Q9UMQ3 279 aaPredicted RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 CABYRO75952 493 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 HIST1H2AGP0C0S8 130 aaPredicted RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 HIST1H2ADP20671 130 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 NYAP1Q6ZVC0 841 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 HIST1H2AHQ96KK5 128 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 HIST1H2AJQ99878 128 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 H2AFJQ9BTM1 129 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 WWP1Q9H0M0 922 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 NFASCO94856 1347 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 SLC12A3P55017 1021 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 C1QBPQ07021 282 aaKnown RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 TERF2Q15554 542 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 FSCN1Q16658 493 aaKnown RBP20.53■□□□□ 0.88
PCDH8-202ENST00000377942 HSP90AA5PQ58FG0 334 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 AGBL2Q5U5Z8 902 aa20.53■□□□□ 0.88
PCDH8-202ENST00000377942 TMEM134Q9H6X4 195 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms