RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TCF4P15884 667 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 CREB1P16220 341 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 GJC1P36383 396 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 RNASEH2BQ5TBB1 312 aaKnown RBP26.4■■□□□ 1.82
ROM1-201ENST00000278833 CYB5D1Q6P9G0 228 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 GRAMD1AQ96CP6 724 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 SLC10A4Q96EP9 437 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 NFKBIZQ9BYH8 718 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 ELP3Q9H9T3 547 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 MGAMO43451 1857 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 LOC102724159A0A0B4J2E5 919 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 C3orf70A6NLC5 250 aaPredicted RBP26.4■■□□□ 1.82
ROM1-201ENST00000278833 SIGLEC16A6NMB1 481 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 F8VP50 259 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 SUN1O94901 812 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 KRT10P13645 584 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 TFDP1Q14186 410 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 PWP2Q15269 919 aaKnown RBP26.4■■□□□ 1.82
ROM1-201ENST00000278833 ATP13A4Q4VNC1 1196 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 TMEM63BQ5T3F8 832 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 SCARA3Q6AZY7 606 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 CYP4F22Q6NT55 531 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 PAXIP1Q6ZW49 1069 aaPredicted RBP26.4■■□□□ 1.82
ROM1-201ENST00000278833 PCGF5Q86SE9 256 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 CYP4X1Q8N118 509 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 TTC13Q8NBP0 860 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 TFAP2BQ92481 460 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 ANKRD36BP1Q96IX9 119 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 PWWP2AQ96N64 755 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 DNAJC17Q9NVM6 304 aaKnown RBP26.4■■□□□ 1.82
ROM1-201ENST00000278833 ZNF148Q9UQR1 794 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 ALOX15BO15296 676 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 PRPF4O43172 522 aaKnown RBP eCLIP26.39■■□□□ 1.82
ROM1-201ENST00000278833 SLC25A27O95847 323 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 SSTR3P32745 418 aaPredicted RBP26.39■■□□□ 1.82
ROM1-201ENST00000278833 ARSEP51690 589 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 SLC25A11Q02978 314 aaKnown RBP26.39■■□□□ 1.82
ROM1-201ENST00000278833 ZBTB33Q86T24 672 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 TCHPQ9BT92 498 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 FAM124BQ9H5Z6 455 aaPredicted RBP26.39■■□□□ 1.82
ROM1-201ENST00000278833 NKIRAS1Q9NYS0 192 aa26.39■■□□□ 1.82
ROM1-201ENST00000278833 TCP11X1B4DZS4 312 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 PI4K2BG5E9Z4 385 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 SMAPO00193 183 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 CHUKO15111 745 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 KRT7P08729 469 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 WEE2P0C1S8 567 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 ATF7P17544 494 aaPredicted RBP26.38■■□□□ 1.81
ROM1-201ENST00000278833 MPP2Q14168 576 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 GALNTL6Q49A17 601 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 CELF3Q5SZQ8 465 aaKnown RBP26.38■■□□□ 1.81
ROM1-201ENST00000278833 RGS9BPQ6ZS82 235 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 RNF149Q8NC42 400 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 CNKSR2Q8WXI2 1034 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 C9orf72Q96LT7 481 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 PRKAG3Q9UGI9 489 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 GCAP28676 217 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 POU5F1BQ06416 359 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 TRABD2AQ86V40 505 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 FGD4Q96M96 766 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 FAM118BQ9BPY3 351 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 VRTNQ9H8Y1 702 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 SAYSD1Q9NPB0 183 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 KLHL11Q9NVR0 708 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 SLC24A2Q9UI40 661 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 TNFSF13BQ9Y275 285 aa26.38■■□□□ 1.81
ROM1-201ENST00000278833 FARP1Q9Y4F1 1045 aaPredicted RBP26.38■■□□□ 1.81
ROM1-201ENST00000278833 MAGEB2O15479 319 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 ACVR2BQ13705 512 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 ACAP1Q15027 740 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 PTPN20Q4JDL3 420 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 ATF7IP2Q5U623 682 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 BBS12Q6ZW61 710 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 GLIS1Q8NBF1 620 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 HAUS2Q9NVX0 235 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 ARL2BPQ9Y2Y0 163 aa26.37■■□□□ 1.81
ROM1-201ENST00000278833 A0A0G2JLL6 359 aaPredicted RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 MGRN1O60291 552 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 CNMDO75829 334 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 PECAM1P16284 738 aaPredicted RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 WDR72Q3MJ13 1102 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 PRRT2Q7Z6L0 340 aaPredicted RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 RASAL3Q86YV0 1011 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 PARP9Q8IXQ6 854 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 THNSL1Q8IYQ7 743 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 PRCCQ92733 491 aaPredicted RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 SSU72Q9NP77 194 aaKnown RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 KCNK9Q9NPC2 374 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 FGFR1OP2Q9NVK5 253 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 FAM47DPA6NHR8 397 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 FAM155AB1AL88 458 aaPredicted RBP26.36■■□□□ 1.81
ROM1-201ENST00000278833 TSHRP16473 764 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 GPS1Q13098 491 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 LRRC14Q15048 493 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 FAM187BQ17R55 369 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 KAZNQ674X7 775 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 DENND1BQ6P3S1 775 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 CENPUQ71F23 418 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 SPATA21Q7Z572 469 aa26.36■■□□□ 1.81
ROM1-201ENST00000278833 CAPNS2Q96L46 248 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms