RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DNERQ8NFT8 737 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 PPCSQ9HAB8 311 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 EBF2Q9HAK2 575 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 SLC24A2Q9UI40 661 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 GRID1Q9ULK0 1009 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 C3orf70A6NLC5 250 aaPredicted RBP16.04■□□□□ 0.16
DDX56-201ENST00000258772 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
DDX56-201ENST00000258772 UNC5CO95185 931 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 WEE2P0C1S8 567 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 MSH2P43246 934 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 RASA2Q15283 850 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 PDK4Q16654 411 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 ACCSLQ4AC99 568 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
DDX56-201ENST00000258772 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 MRRFQ96E11 262 aaKnown RBP16.04■□□□□ 0.16
DDX56-201ENST00000258772 STAMBPL1Q96FJ0 436 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 SLCO1B3Q9NPD5 702 aa16.04■□□□□ 0.16
DDX56-201ENST00000258772 FARP1Q9Y4F1 1045 aaPredicted RBP16.04■□□□□ 0.16
DDX56-201ENST00000258772 A0A1W2PPM1 405 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 CA4P22748 312 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 ELF1P32519 619 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 GPX6P59796 221 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 MOGSQ13724 837 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 TLDC1Q6P9B6 456 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 PCGF5Q86SE9 256 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 L3MBTL3Q96JM7 780 aaPredicted RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 PSMC3IPQ9P2W1 217 aaPredicted RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 SAE1Q9UBE0 346 aaPredicted RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 STK38LQ9Y2H1 464 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 A8MUI8 341 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 GOLGA8MH3BSY2 632 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 TYROBPO43914 113 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 BANF1O75531 89 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 STAT5BP51692 787 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 EFNA5P52803 228 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 TRPC3Q13507 836 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 SLC1A5Q15758 541 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 HIF1AQ16665 826 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 ANKMY2Q8IV38 441 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 ACTL9Q8TC94 416 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 THOC1Q96FV9 657 aaKnown RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 ACO2Q99798 780 aaKnown RBP16.03■□□□□ 0.16
DDX56-201ENST00000258772 MYLK2Q9H1R3 596 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 CEP83Q9Y592 693 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 SNCAIPQ9Y6H5 919 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
DDX56-201ENST00000258772 OGTO15294 1046 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 EDF1O60869 148 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 FARP2O94887 1054 aaPredicted RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 ANP32DO95626 131 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 PSMA2P25787 234 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 PSMC4P43686 418 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 GMPSP49915 693 aaPredicted RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 GEMIN4P57678 1058 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 OTUD4Q01804 1114 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 SLC25A11Q02978 314 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 N4BP2L2Q92802 583 aaPredicted RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 ADAM33Q9BZ11 813 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 ETNK1Q9HBU6 452 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 RABGEF1Q9UJ41 708 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 CPSF3Q9UKF6 684 aaKnown RBP16.02■□□□□ 0.16
DDX56-201ENST00000258772 STRIP2Q9ULQ0 834 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 CLUHO75153 1309 aa16.02■□□□□ 0.16
DDX56-201ENST00000258772 SIGLEC16A6NMB1 481 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 CCND1P24385 295 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.15
DDX56-201ENST00000258772 GDF10P55107 478 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 DYNLT1P63172 113 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 TFAMQ00059 246 aaKnown RBP16.02■□□□□ 0.15
DDX56-201ENST00000258772 GAD2Q05329 585 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 SETDB1Q15047 1291 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 PTPN20Q4JDL3 420 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 LRRC8CQ8TDW0 803 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 ZWILCHQ9H900 591 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 TXLNGQ9NUQ3 528 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 CHKBQ9Y259 395 aa16.02■□□□□ 0.15
DDX56-201ENST00000258772 LOC102724159A0A0B4J2E5 919 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 CST8O60676 142 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 LRCH4O75427 683 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 KRT3P12035 628 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 IL1R2P27930 398 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms