RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 A0A1W2PQ64 194 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 A0A1W2PQD8 194 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 KLRC4O43908 158 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 MOSPD3O75425 235 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 STARD6P59095 220 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 PRKCQQ04759 706 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 PSMD6Q15008 389 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 FAM78AQ5JUQ0 283 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 TANGO2Q6ICL3 276 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 TMC8Q8IU68 726 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 OR5B17Q8NGF7 314 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 FAM200AQ8TCP9 573 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 CCDC47Q96A33 483 aaKnown RBP25.07■■□□□ 1.6
LSM7-204ENST00000587502 E2F7Q96AV8 911 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 HPDLQ96IR7 371 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 LRRC3Q9BY71 257 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 GDPD2Q9HCC8 539 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 DDX43Q9NXZ2 648 aaKnown RBP25.07■■□□□ 1.6
LSM7-204ENST00000587502 PCDHB5Q9Y5E4 795 aa25.07■■□□□ 1.6
LSM7-204ENST00000587502 DLATP10515 647 aaKnown RBP25.06■■□□□ 1.6
LSM7-204ENST00000587502 TNNI1P19237 187 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 PCSK1P29120 753 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 CYP24A1Q07973 514 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 TAF12Q16514 161 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 KMT5BQ4FZB7 885 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 SLC44A4Q53GD3 710 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 LMBRD2Q68DH5 695 aaPredicted RBP25.06■■□□□ 1.6
LSM7-204ENST00000587502 LRRTM3Q86VH5 581 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 SHKBP1Q8TBC3 707 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 SLITRK6Q9H5Y7 841 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 TRPV4Q9HBA0 871 aa25.06■■□□□ 1.6
LSM7-204ENST00000587502 PI15O43692 258 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 EXOC3O60645 756 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 KIF20AO95235 890 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 HAPLN1P10915 354 aaPredicted RBP25.05■■□□□ 1.6
LSM7-204ENST00000587502 NDUFA8P51970 172 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 STK4Q13043 487 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 TEAD2Q15562 447 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 MLF2Q15773 248 aaPredicted RBP25.05■■□□□ 1.6
LSM7-204ENST00000587502 TRAPPC11Q7Z392 1133 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 CCDC105Q8IYK2 499 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 ADGRF2Q8IZF7 708 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 TTC9BQ8N6N2 239 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 TMEM174Q8WUU8 243 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 ATOH1Q92858 354 aaPredicted RBP25.05■■□□□ 1.6
LSM7-204ENST00000587502 CCDC34Q96HJ3 373 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 CGRRF1Q99675 332 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 ABCB6Q9NP58 842 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 ABI2Q9NYB9 513 aaPredicted RBP25.05■■□□□ 1.6
LSM7-204ENST00000587502 SIT1Q9Y3P8 196 aa25.05■■□□□ 1.6
LSM7-204ENST00000587502 A0A1W2PRU2 124 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 FCARP24071 287 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 SNW1Q13573 536 aaKnown RBP25.04■■□□□ 1.6
LSM7-204ENST00000587502 ARHGAP15Q53QZ3 475 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 POTEHQ6S545 545 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 ZSCAN18Q8TBC5 510 aaPredicted RBP25.04■■□□□ 1.6
LSM7-204ENST00000587502 DEPDC1BQ8WUY9 529 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 DNASE1L2Q92874 299 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 CCDC127Q96BQ5 260 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 ZSWIM3Q96MP5 696 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 TRMT61BQ9BVS5 477 aaKnown RBP25.04■■□□□ 1.6
LSM7-204ENST00000587502 PLA2G2FQ9BZM2 168 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 PTPRJQ12913 1337 aa25.04■■□□□ 1.6
LSM7-204ENST00000587502 GABRDO14764 452 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 SOAT2O75908 522 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 RPN1P04843 607 aaKnown RBP25.03■■□□□ 1.6
LSM7-204ENST00000587502 GJA1P17302 382 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 PSMC3P17980 439 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 CDC25CP30307 473 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 SOWAHAQ2M3V2 549 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 INTS6LQ5JSJ4 861 aaKnown RBP25.03■■□□□ 1.6
LSM7-204ENST00000587502 SLC9A9Q8IVB4 645 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 FSIP1Q8NA03 581 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 DTWD2Q8NBA8 298 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 KIAA0895Q8NCT3 520 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 GCNAQ96QF7 691 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 ATXN3LQ9H3M9 355 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 ZMYM5Q9UJ78 669 aa25.03■■□□□ 1.6
LSM7-204ENST00000587502 H0Y858 1186 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 FAM163BP0C2L3 166 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 AP3M2P53677 418 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 LIMS2Q7Z4I7 341 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 ALYREFQ86V81 257 aaKnown RBP25.02■■□□□ 1.6
LSM7-204ENST00000587502 IRF7Q92985 503 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 FAM84AQ96KN4 292 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 LPIN3Q9BQK8 851 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 BRD9Q9H8M2 597 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 CHMP5Q9NZZ3 219 aa25.02■■□□□ 1.6
LSM7-204ENST00000587502 KANSL1LA0AUZ9 987 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 PDXKO00764 312 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 ATF6P18850 670 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 GABRR2P28476 465 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 MRE11P49959 708 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 RPL10AP62906 217 aaKnown RBP25.01■■□□□ 1.59
LSM7-204ENST00000587502 TRPC3Q13507 836 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 GAREM2Q75VX8 874 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 MFSD6LQ8IWD5 586 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 PJA1Q8NG27 643 aa25.01■■□□□ 1.59
LSM7-204ENST00000587502 FUBP3Q96I24 572 aaKnown RBP eCLIP25.01■■□□□ 1.59
LSM7-204ENST00000587502 NELL2Q99435 816 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms