RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 A0A1W2PRU2 124 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 MOSPD3O75425 235 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 MICAL2O94851 1124 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZNF202O95125 648 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 TUFMP49411 452 aaKnown RBP22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 DPYDQ12882 1025 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 VEPH1Q14D04 833 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 FAM78AQ5JUQ0 283 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 ITIH5Q86UX2 942 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 OSTM1Q86WC4 334 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 TMC8Q8IU68 726 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 TOP6BLQ8N6T0 577 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 SHKBP1Q8TBC3 707 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 SPPL2BQ8TCT7 592 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 C2orf15Q8WU43 125 aaKnown RBP22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 ARHGEF3Q9NR81 526 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 ASB3Q9Y575 518 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 PCDHB5Q9Y5E4 795 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 NUP210Q8TEM1 1887 aaPredicted RBP22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 MIA3Q5JRA6 1907 aa22.7■■□□□ 1.22
HCFC1R1-209ENST00000576921 COL4A3Q01955 1670 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 GOLGA6L4A6NEF3 574 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 HCRTO43612 131 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 ECI2O75521 394 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 CLSTN1O94985 981 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 NPR3P17342 541 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 ATF6P18850 670 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 CASP4P49662 377 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 CLCN5P51795 746 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 SMARCB1Q12824 385 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 TAF12Q16514 161 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 TANGO2Q6ICL3 276 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 DNAJB7Q7Z6W7 309 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 GIPC2Q8TF65 315 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 PSMG2Q969U7 264 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZSWIM3Q96MP5 696 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 PRRX2Q99811 253 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 PLA2G2FQ9BZM2 168 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 KCTD10Q9H3F6 313 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZNF334Q9HCZ1 680 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 TMLHEQ9NVH6 421 aa22.69■■□□□ 1.22
HCFC1R1-209ENST00000576921 OBSL1O75147 1896 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 FCARP24071 287 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 PTPN5P54829 565 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 NHLH1Q02575 133 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 SOWAHAQ2M3V2 549 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 INTS6LQ5JSJ4 861 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 ELSPBP1Q96BH3 223 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 ASB16Q96NS5 453 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 ACBD6Q9BR61 282 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 PI4K2AQ9BTU6 479 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 LRRC3Q9BY71 257 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 TBC1D17Q9HA65 648 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZFP14Q9HCL3 533 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 DENND4CQ5VZ89 1909 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 TICRRQ7Z2Z1 1910 aa22.68■■□□□ 1.22
HCFC1R1-209ENST00000576921 PHACTR2O75167 634 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 RHOBTB3O94955 611 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 NR3C1P04150 777 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 HAPLN1P10915 354 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 AOC1P19801 751 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 GABRR2P28476 465 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 PCSK1P29120 753 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 LHX1P48742 406 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 TRPC3Q13507 836 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 GRM2Q14416 872 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 NFE2Q16621 373 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 CCDC142Q17RM4 750 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZSCAN18Q8TBC5 510 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 SMARCD2Q92925 531 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 CCDC34Q96HJ3 373 aa22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 GZF1Q9H116 711 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZNF638Q14966 1978 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-209ENST00000576921 PDXKO00764 312 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 PI15O43692 258 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 CALUO43852 315 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 KIF20AO95235 890 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 CST3P01034 146 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 TCF15Q12870 199 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 BIRC3Q13489 604 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 SNW1Q13573 536 aaKnown RBP22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 STXBP5Q5T5C0 1151 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 CEP135Q66GS9 1140 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 STKLD1Q8NE28 680 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 PLEKHO2Q8TD55 490 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 ZNF516Q92618 1163 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 GCNAQ96QF7 691 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 ATXN3LQ9H3M9 355 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 DMAC2Q9NW81 257 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 GTF3C4Q9UKN8 822 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 PTPRDP23468 1912 aa22.66■■□□□ 1.22
HCFC1R1-209ENST00000576921 LRRIQ3A6PVS8 624 aaPredicted RBP22.65■■□□□ 1.22
HCFC1R1-209ENST00000576921 GABRDO14764 452 aa22.65■■□□□ 1.22
HCFC1R1-209ENST00000576921 FGF19O95750 216 aa22.65■■□□□ 1.22
HCFC1R1-209ENST00000576921 GPR15P49685 360 aa22.65■■□□□ 1.22
HCFC1R1-209ENST00000576921 TNNC1P63316 161 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms