RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 HOMER3Q9NSC5 361 aa15.33■□□□□ 0.05
RABGGTA-212ENST00000559974 WHRNQ9P202 907 aa15.33■□□□□ 0.05
RABGGTA-212ENST00000559974 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.05
RABGGTA-212ENST00000559974 LCMT1Q9UIC8 334 aa15.33■□□□□ 0.05
RABGGTA-212ENST00000559974 USTQ9Y2C2 406 aa15.33■□□□□ 0.05
RABGGTA-212ENST00000559974 TMEM191CA6NGB0 347 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 MAGEB2O15479 319 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 RALAP11233 206 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 EIF4BP23588 611 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 MDH1P40925 334 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 RPL7AP62424 266 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 GUCY1A3Q02108 690 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 HOOK3Q86VS8 718 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 TMEM192Q8IY95 271 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 PPTC7Q8NI37 304 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 ATG4AQ8WYN0 398 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 RSPH14Q9UHP6 348 aa15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 FEZ2Q9UHY8 353 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-212ENST00000559974 TCRBV5S1A1TA0A578 114 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 GAS8O95995 478 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 ZNF865P0CJ78 1059 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 LSP1P33241 339 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 SSR1P43307 286 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 TNFAIP2Q03169 654 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 PTK6Q13882 451 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 DNAJC24Q6P3W2 148 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 LINC01465Q8N7H1 131 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 TFAP2BQ92481 460 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 RNF25Q96BH1 459 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 OSBPL8Q9BZF1 889 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 CEP83Q9Y592 693 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 COL1A2P08123 1366 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 TRIP11Q15643 1979 aa15.32■□□□□ 0.04
RABGGTA-212ENST00000559974 A0A087WZ62 844 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 RBM47A0AV96 593 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ZEB2O60315 1214 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SHBGP04278 402 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 KRT19P08727 400 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 MCF2P10911 925 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 RARGP13631 454 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 TAP1Q03518 808 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 AMHR2Q16671 573 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 WDTC1Q8N5D0 677 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SH3TC2Q8TF17 1288 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 MCEEQ96PE7 176 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 LRRC4CQ9HCJ2 640 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ASIC3Q9UHC3 531 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SIX4Q9UIU6 781 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 POLIQ9UNA4 740 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 NOVA2Q9UNW9 492 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 R3HDM2Q9Y2K5 976 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 NFICP08651 508 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 STAG3L1P0CL83 205 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 GJC1P36383 396 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 PPP2R2AP63151 447 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 CACNB2Q08289 660 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 CCNG2Q16589 344 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ZNF667Q5HYK9 610 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ERICH1Q86X53 443 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 C1orf127Q8N9H9 656 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 RAET1EQ8TD07 263 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 AFG1LQ8WV93 481 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SNF8Q96H20 258 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 CCDC114Q96M63 670 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 BCO2Q9BYV7 579 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 SEMA4AQ9H3S1 761 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 AKT3Q9Y243 479 aa15.31■□□□□ 0.04
RABGGTA-212ENST00000559974 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 TP73O15350 636 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 ZNF286BP0CG31 522 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 ITIH2P19823 946 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 FGFR4P22455 802 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 CETN2P41208 172 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 ZNF252P-AS1Q0IIN9 211 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 DCUN1D2Q6PH85 259 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 SRLQ86TD4 932 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 C3orf20Q8ND61 904 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 TLCD1Q96CP7 247 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 EPN3Q9H201 632 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 SLC12A6Q9UHW9 1150 aa15.3■□□□□ 0.04
RABGGTA-212ENST00000559974 SRRM3A6NNA2 597 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-212ENST00000559974 RIPK2O43353 540 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms