RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 FAM49AQ9H0Q0 323 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 IP6K2Q9UHH9 426 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 NR2E3Q9Y5X4 410 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 SCINQ9Y6U3 715 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 SPATA31C2B4DYI2 1134 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 IRF6O14896 467 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ATP2A1O14983 1001 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 FSBPO95073 299 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 NAMPTP43490 491 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 ALDH5A1P51649 535 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 DRG2P55039 364 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 PPP1R21Q6ZMI0 780 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 CATSPERGQ6ZRH7 1159 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 SPATA21Q7Z572 469 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 CFAP36Q96G28 342 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 TRABDQ9H4I3 376 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 SMYD3Q9H7B4 428 aa14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 USP15Q9Y4E8 981 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-209ENST00000548825 FOCADQ5VW36 1801 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 A0A0B4J269 797 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 IGF2BP3O00425 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 AVILO75366 819 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ACO1P21399 889 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 SLC1A1P43005 524 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 TFDP1Q14186 410 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 Q3C1V9 767 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 EFCAB12Q6NXP0 572 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 VSTM1Q6UX27 236 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 RFX8Q6ZV50 586 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 CNPY4Q8N129 248 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 RMDN2Q96LZ7 410 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 SMC6Q96SB8 1091 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 CGRRF1Q99675 332 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 NTPCRQ9BSD7 190 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ASCC2Q9H1I8 757 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ST6GALNAC4Q9H4F1 302 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 WHRNQ9P202 907 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 BRWD3Q6RI45 1802 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 STBD1O95210 358 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ATP5DP30049 168 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 C15orf59Q2T9L4 293 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 SPOCD1Q6ZMY3 1216 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 C12orf29Q8N999 325 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 SEPT1Q8WYJ6 367 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 CCT6BQ92526 530 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 FAM81BQ96LP2 452 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 KIAA1586Q9HCI6 787 aa14.4□□□□□ -0.1
PRPF40B-209ENST00000548825 E2F8A0AVK6 867 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 ADCY3O60266 1144 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 CDH16O75309 829 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 NFICP08651 508 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 KRT4P19013 534 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 GBP1P32455 592 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 CTCFP49711 727 aaPredicted RBP14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 SESN3P58005 492 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 MYO1EQ12965 1108 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 ANKRD22Q5VYY1 191 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM160B1Q5W0V3 765 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 DARS2Q6PI48 645 aaKnown RBP14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 C6orf89Q6UWU4 347 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 C3orf62Q6ZUJ4 267 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 ANKRD36BP1Q96IX9 119 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 C17orf75Q9HAS0 396 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 ETNK1Q9HBU6 452 aa14.4□□□□□ -0.11
PRPF40B-209ENST00000548825 A0A0G2JND7 137 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 H0YCG3 227 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 LDHAP00338 332 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 TARSP26639 723 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 TGFB2P61812 414 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 ERP27Q96DN0 273 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 KLRG1Q96E93 195 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 SLITRK1Q96PX8 696 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 MINDY3Q9H8M7 445 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 RPF1Q9H9Y2 349 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 MAD1L1Q9Y6D9 718 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 SNX3O60493 162 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 TBXAS1P24557 533 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 IVDP26440 423 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 RPA3P35244 121 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 MAP2K2P36507 400 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 CDH6P55285 790 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 PTK6Q13882 451 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 PTPN20Q4JDL3 420 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 ARHGEF18Q6ZSZ5 1173 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 NLGN2Q8NFZ4 835 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 NLRP7Q8WX94 980 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms