RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 RNF180Q86T96 592 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 THNSL2Q86YJ6 484 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 LYSMD2Q8IV50 215 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 FERMT2Q96AC1 680 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 NSUN4Q96CB9 384 aaKnown RBP6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 HIST1H2AHQ96KK5 128 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 HIST1H2AJQ99878 128 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 OSBPL6Q9BZF3 934 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 PRDM12Q9H4Q4 367 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 PIH1D3Q9NQM4 214 aaKnown RBP6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 RNF186Q9NXI6 227 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 ING3Q9NXR8 418 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 SYNPO2Q9UMS6 1093 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 MAPRE3Q9UPY8 281 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 LAMB1P07942 1786 aa6.11□□□□□ -1.43
GCSHP4-201ENST00000538792 DDTLA6NHG4 134 aaPredicted RBP6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 SLPIP03973 132 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 JUNP05412 331 aaKnown RBP6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 BPIP17213 487 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 ID4P47928 161 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 HHEXQ03014 270 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 TCP10Q12799 353 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 FKBP1CQ5VVH2 108 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 KRT40Q6A162 431 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 Q6ZRM9 215 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 FAM83AQ86UY5 434 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 CDYL2Q8N8U2 506 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 SPATA5Q8NB90 893 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 SLC5A5Q92911 643 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 TCF25Q9BQ70 676 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 ZNF341Q9BYN7 854 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 ANO3Q9BYT9 981 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 NCDNQ9UBB6 729 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 ABCF2Q9UG63 623 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 DDX19BQ9UMR2 479 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 HS3ST3A1Q9Y663 406 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 CDK5RAP2Q96SN8 1893 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 SIPA1L1O43166 1804 aa6.1□□□□□ -1.43
GCSHP4-201ENST00000538792 MROH7-TTC4A0A0A0MT08 1334 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 GPR75-ASB3A0A0A6YYF3 556 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 MAFGO15525 162 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 KDM1AO60341 852 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 FZD7O75084 574 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 STC2O76061 302 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 SEC24DO94855 1032 aaPredicted RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 LY86O95711 162 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 CFBP00751 764 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 CLEC2LP0C7M8 214 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 BTDP43251 543 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 TM4SF4P48230 202 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 SCNN1GP51170 649 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 MANFP55145 182 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 RRP1P56182 461 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 PTH1RQ03431 593 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 VGLL4Q14135 290 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 RRP1BQ14684 758 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 ARMC9Q7Z3E5 817 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 STRA8Q7Z7C7 330 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 C11orf74Q86VG3 221 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 RPAP2Q8IXW5 612 aaPredicted RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 UBR7Q8N806 425 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 CACTINQ8WUQ7 758 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 FAM151AQ8WW52 585 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 ZKSCAN4Q969J2 545 aaPredicted RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 EDC3Q96F86 508 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 UIMC1Q96RL1 719 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 IDI2Q9BXS1 227 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 CEP72Q9P209 647 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 GIT1Q9Y2X7 761 aa6.09□□□□□ -1.43
GCSHP4-201ENST00000538792 AK9Q5TCS8 1911 aa6.09□□□□□ -1.44
GCSHP4-201ENST00000538792 DOCK2Q92608 1830 aa6.09□□□□□ -1.44
GCSHP4-201ENST00000538792 RPAP1Q9BWH6 1393 aaPredicted RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 MAST3O60307 1309 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 NEMP1O14524 444 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 FSBPO95073 299 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 NF2P35240 595 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 GDF5P43026 501 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 DYNLL1P63167 89 aaKnown RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 OS9Q13438 667 aaPredicted RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 TNFAIP1Q13829 316 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 TRIM25Q14258 630 aaKnown RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 DHCR24Q15392 516 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 SHROOM1Q2M3G4 852 aaPredicted RBP6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 SUPT20HL1Q3ZLR7 823 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 ATP13A4Q4VNC1 1196 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 TTC39AQ5SRH9 613 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 AACSQ86V21 672 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 SLC41A1Q8IVJ1 513 aa6.08□□□□□ -1.44
GCSHP4-201ENST00000538792 UNC5BQ8IZJ1 945 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms