RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 TRAF3IP3Q9Y228 551 aa20.55■□□□□ 0.88
PKP3-204ENST00000526971 MRPS23Q9Y3D9 190 aaKnown RBP20.55■□□□□ 0.88
PKP3-204ENST00000526971 TIMM13Q9Y5L4 95 aaPredicted RBP20.55■□□□□ 0.88
PKP3-204ENST00000526971 WDR27A2RRH5 827 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 ITGB3P05106 788 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 TMEM191BP0C7N4 346 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 FCARP24071 287 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 POLR2BP30876 1174 aaKnown RBP20.54■□□□□ 0.88
PKP3-204ENST00000526971 PNPLA4P41247 253 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 YWHAHQ04917 246 aaPredicted RBP20.54■□□□□ 0.88
PKP3-204ENST00000526971 MYBPC2Q14324 1141 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 ZNF528Q3MIS6 628 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 LMBRD2Q68DH5 695 aaPredicted RBP20.54■□□□□ 0.88
PKP3-204ENST00000526971 TPRG1Q6ZUI0 275 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 USP37Q86T82 979 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 WDR49Q8IV35 697 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 CSGALNACT2Q8N6G5 542 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 OR5B17Q8NGF7 314 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 CXorf38Q8TB03 319 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 SMARCE1Q969G3 411 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 BORCS6Q96GS4 357 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 ANKRD36BP1Q96IX9 119 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 OSBPL6Q9BZF3 934 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 MTMR12Q9C0I1 747 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 AGAP1Q9UPQ3 857 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 PCDHA5Q9Y5H7 936 aa20.54■□□□□ 0.88
PKP3-204ENST00000526971 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 ARHGEF37A1IGU5 675 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 LAMTOR5O43504 91 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 CALUO43852 315 aaPredicted RBP20.53■□□□□ 0.88
PKP3-204ENST00000526971 PRPF40AO75400 957 aaKnown RBP20.53■□□□□ 0.88
PKP3-204ENST00000526971 ECI2O75521 394 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 NR3C1P04150 777 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 ODC1P11926 461 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 UBE2HP62256 183 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 RBP5P82980 135 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 PFKPQ01813 784 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 FZD5Q13467 585 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 SV2CQ496J9 727 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 PRSS36Q5K4E3 855 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 TANGO2Q6ICL3 276 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 DGLUCYQ7Z3D6 616 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 LRRC52Q8N7C0 313 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 ZNF461Q8TAF7 563 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 ERCC4Q92889 916 aaPredicted RBP20.53■□□□□ 0.88
PKP3-204ENST00000526971 CCDC127Q96BQ5 260 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 TCEAL4Q96EI5 215 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 ZNF560Q96MR9 790 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 FNBP1Q96RU3 617 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 OXCT2Q9BYC2 517 aaPredicted RBP20.53■□□□□ 0.88
PKP3-204ENST00000526971 AVENQ9NQS1 362 aaPredicted RBP20.53■□□□□ 0.88
PKP3-204ENST00000526971 HEBP1Q9NRV9 189 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 FBXO4Q9UKT5 387 aa20.53■□□□□ 0.88
PKP3-204ENST00000526971 KPNA7A9QM74 516 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 CYB561D2O14569 222 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 ABLIM3O94929 683 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 TNNC2P02585 160 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 CYP11A1P05108 521 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 DLATP10515 647 aaKnown RBP20.52■□□□□ 0.88
PKP3-204ENST00000526971 ARPP19P56211 112 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 CSTF1Q05048 431 aaKnown RBP20.52■□□□□ 0.88
PKP3-204ENST00000526971 SCARA3Q6AZY7 606 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 OVOS1Q6IE37 1185 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 RTL10Q7L3V2 364 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 SMYD4Q8IYR2 804 aaPredicted RBP20.52■□□□□ 0.88
PKP3-204ENST00000526971 CLDN23Q96B33 292 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 CGRRF1Q99675 332 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
PKP3-204ENST00000526971 DLL3Q9NYJ7 618 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 SIX4Q9UIU6 781 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 DSEQ9UL01 958 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 TCHHQ07283 1943 aa20.52■□□□□ 0.88
PKP3-204ENST00000526971 OR6C75A6NL08 312 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 SEC24AO95486 1093 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 KRT19P08727 400 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 TNNI1P19237 187 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 CCR2P41597 374 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 NFIL3Q16649 462 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 ZNF658Q5TYW1 1059 aaPredicted RBP20.51■□□□□ 0.87
PKP3-204ENST00000526971 TSSK4Q6SA08 328 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 ZNF687Q8N1G0 1237 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 NELL1Q92832 810 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
PKP3-204ENST00000526971 GTPBP4Q9BZE4 634 aaKnown RBP20.51■□□□□ 0.87
PKP3-204ENST00000526971 GDE1Q9NZC3 331 aa20.51■□□□□ 0.87
PKP3-204ENST00000526971 TPRP12270 2363 aaKnown RBP20.51■□□□□ 0.87
PKP3-204ENST00000526971 ANK1P16157 1881 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 ATF2P15336 505 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 CASP4P49662 377 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 GRM2Q14416 872 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 PUM1Q14671 1186 aaKnown RBP eCLIP20.5■□□□□ 0.87
PKP3-204ENST00000526971 COBLL1Q53SF7 1204 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 TPGS2Q68CL5 300 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 TRAPPC11Q7Z392 1133 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 METTL23Q86XA0 190 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 ZBTB44Q8NCP5 570 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 PLEKHO2Q8TD55 490 aa20.5■□□□□ 0.87
PKP3-204ENST00000526971 ELSPBP1Q96BH3 223 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms