RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 DUOXA1Q1HG43 343 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 SPDYCQ5MJ68 293 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 BRF1Q92994 677 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 OXCT2Q9BYC2 517 aaPredicted RBP15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 ECT2Q9H8V3 914 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 DNAAF2Q9NVR5 837 aaKnown RBP15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 MMP17Q9ULZ9 603 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 DENND4CQ5VZ89 1909 aa15.15■□□□□ 0.02
NKX3-1-202ENST00000523261 ANTXRLA6NF34 631 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 M0QZQ0 153 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 CCNT1O60563 726 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 HNRNPLP14866 589 aaKnown RBP eCLIP15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 OSTNP61366 133 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 CRY1Q16526 586 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 Q6ZUG5 572 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 SLCO6A1Q86UG4 719 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 ZNF843Q8N446 348 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 CPA6Q8N4T0 437 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 CEP76Q8TAP6 659 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 SPACA7Q96KW9 195 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 GCNAQ96QF7 691 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 LPIN3Q9BQK8 851 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 KIF9Q9HAQ2 790 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 ZMYM5Q9UJ78 669 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 PCDHB9Q9Y5E1 797 aa15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 TIMM13Q9Y5L4 95 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 ZNF638Q14966 1978 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-202ENST00000523261 OR6C75A6NL08 312 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 J3QKU1 62 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 ARHGAP33O14559 1287 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CITO14578 2027 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 GJB3O75712 270 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CPA1P15085 419 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 AVPR1AP37288 418 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 NAMPTP43490 491 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 BFSP1Q12934 665 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 SLC14A1Q13336 389 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 MAP7D1Q3KQU3 841 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 GALNT17Q6IS24 598 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CC2D1AQ6P1N0 951 aaPredicted RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 TMEM92Q6UXU6 159 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 TOGARAM2Q6ZUX3 1019 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 APBB1IPQ7Z5R6 666 aaPredicted RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 TTC30AQ86WT1 665 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 SLFN12Q8IYM2 578 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 MAB21L3Q8N8X9 362 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CCDC26Q8TAB7 109 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 DEPTORQ8TB45 409 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CDT1Q9H211 546 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 POLMQ9NP87 494 aaPredicted RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 TDP1Q9NUW8 608 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CNTN3Q9P232 1028 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 APOBEC2Q9Y235 224 aaKnown RBP15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 TNFSF13BQ9Y275 285 aa15.13■□□□□ 0.01
NKX3-1-202ENST00000523261 GOLGA4Q13439 2230 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 K7EQS6 105 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 LARGE1O95461 756 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 ATP2B1P20020 1258 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 ABCG1P45844 678 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 CYP4F3Q08477 520 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 LMBRD2Q68DH5 695 aaPredicted RBP15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 TMPRSS7Q7RTY8 843 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 TMEM150AQ86TG1 271 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 NAXDQ8IW45 347 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 LSM14AQ8ND56 463 aaKnown RBP15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 KIFC3Q9BVG8 833 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 HSFX1Q9UBD0 423 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 PTPRQQ9UMZ3 2332 aa15.12■□□□□ 0.01
NKX3-1-202ENST00000523261 CEP192Q8TEP8 1941 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 ATF6P18850 670 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 SEC13P55735 322 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 KRT32Q14532 448 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 NBR1Q14596 966 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 VEPH1Q14D04 833 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 GLRX5Q86SX6 157 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 TMEM130Q8N3G9 435 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 PTPRHQ9HD43 1115 aa15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 KIAA1522Q9P206 1035 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-202ENST00000523261 OBSL1O75147 1896 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 TRABD2BA6NFA1 517 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 CBFA2T3O75081 653 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 EFNA5P52803 228 aa15.1■□□□□ 0.01
NKX3-1-202ENST00000523261 CCT2P78371 535 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms