RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 FAF1Q9UNN5 650 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 hCG_2014768A0A024R1R8 64 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 PHF2O75151 1096 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 AGTP01019 485 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CDC25CP30307 473 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 DHX34Q14147 1143 aaKnown RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 MAP4K3Q8IVH8 894 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CNPY4Q8N129 248 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 APPL2Q8NEU8 664 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 REPS2Q8NFH8 660 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 ATL2Q8NHH9 583 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 FEZF2Q8TBJ5 459 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 ARHGEF26Q96DR7 871 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 ADCY3O60266 1144 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 GCLCP48506 637 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ARL4CP56559 192 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 EIF3EP60228 445 aaKnown RBP11.87□□□□□ -0.51
SMPD4-218ENST00000482171 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 TMEM161BQ8NDZ6 487 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 BAP1Q92560 729 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CAVIN3Q969G5 261 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CGRRF1Q99675 332 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CARD9Q9H257 536 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CASQ2O14958 399 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CST8O60676 142 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ATP5HO75947 161 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 SLC1A1P43005 524 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ARHGEF6Q15052 776 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 RAPH1Q70E73 1250 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 FUKQ8N0W3 1084 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CCDC33Q8N5R6 958 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 DPP3Q9NY33 737 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 CAND2O75155 1236 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 IL18RAPO95256 599 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 GLRA2P23416 452 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 HSD17B4P51659 736 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 P3H1Q32P28 736 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 NOTUMQ6P988 496 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 C4orf50Q6ZRC1 276 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 DCLK2Q8N568 766 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 SNF8Q96H20 258 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 TNIP3Q96KP6 325 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 STAP1Q9ULZ2 295 aa11.87□□□□□ -0.51
SMPD4-218ENST00000482171 M0R2N6 131 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 TRPA1O75762 1119 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 FSBPO95073 299 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 TSPY1Q01534 308 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 KLC1Q07866 573 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 SLC13A5Q86YT5 568 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 KLC2Q9H0B6 622 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PDGFCQ9NRA1 345 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PPP1R12AO14974 1030 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 GAS2O43903 313 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 BNIP3LO60238 219 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 AP1B1Q10567 949 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 TMED1Q13445 227 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 KYNUQ16719 465 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 GRAMD1BQ3KR37 738 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PCGF5Q86SE9 256 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 THEM5Q8N1Q8 247 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 CEP120Q8N960 986 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 GTF3C2Q8WUA4 911 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 FGD4Q96M96 766 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 ERP44Q9BS26 406 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 SH3BGRP55822 239 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 GOLGA7BQ2TAP0 167 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 HSDL1Q3SXM5 330 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 ZNF484Q5JVG2 852 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 MEI1Q5TIA1 1274 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 ZNF662Q6ZS27 426 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PIP4K2CQ8TBX8 421 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 TRIM55Q9BYV6 548 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 DLGAP2Q9P1A6 1054 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 CRCPO75575 148 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 AKAP5P24588 427 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 MYBPC2Q14324 1141 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 HYIQ5T013 277 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 HEATR6Q6AI08 1181 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 DNAJB3Q8WWF6 145 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms