RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MYO1CO00159 1063 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 POLRMTO00411 1230 aaKnown RBP7.15□□□□□ -1.26
VPS50-212ENST00000476413 FFAR2O15552 330 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 NDST3O95803 873 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 BTF3P20290 206 aaKnown RBP7.15□□□□□ -1.26
VPS50-212ENST00000476413 COMTP21964 271 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 IL1R2P27930 398 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 GABRB3P28472 473 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
VPS50-212ENST00000476413 ICA1Q05084 483 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 TSHZ3Q63HK5 1081 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 FCRL6Q6DN72 434 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 TAPT1Q6NXT6 567 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 TLDC1Q6P9B6 456 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 ZNF527Q8NB42 609 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 OR56A1Q8NGH5 318 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 POC1BQ8TC44 478 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 RAPGEF4Q8WZA2 1011 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.15□□□□□ -1.26
VPS50-212ENST00000476413 XPNPEP3Q9NQH7 507 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 PCDHGB3Q9Y5G1 929 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 AATKQ6ZMQ8 1374 aa7.15□□□□□ -1.26
VPS50-212ENST00000476413 CCDC189A1A4V9 331 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 FGAP02671 866 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ELANEP08246 267 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 MYL4P12829 197 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 CHRM3P20309 590 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ZNF134P52741 427 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 RAPGEF1Q13905 1077 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ELF2Q15723 593 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 NPY5RQ15761 445 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ZIK1Q3SY52 487 aaPredicted RBP7.14□□□□□ -1.27
VPS50-212ENST00000476413 TAF2Q6P1X5 1199 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 LRRC55Q6ZSA7 311 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ZNF280BQ86YH2 543 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 SIAH1Q8IUQ4 282 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 SDR16C5Q8N3Y7 309 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 GLIS1Q8NBF1 620 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 PSD4Q8NDX1 1056 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 ZNF384Q8TF68 577 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 LRRC46Q96FV0 321 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 TRIB1Q96RU8 372 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 PNKPQ96T60 521 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 NELL2Q99435 816 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 HEPHQ9BQS7 1158 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 TEX101Q9BY14 249 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 GPR87Q9BY21 358 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 SMOC2Q9H3U7 446 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 AGO4Q9HCK5 861 aaKnown RBP7.14□□□□□ -1.27
VPS50-212ENST00000476413 SLC39A10Q9ULF5 831 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 CAPN11Q9UMQ6 739 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
VPS50-212ENST00000476413 CEP83Q9Y592 693 aa7.14□□□□□ -1.27
VPS50-212ENST00000476413 XDHP47989 1333 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 A0A1B0GTW7 788 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 FAM234BA2RU67 622 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 GOLGA6L3A6NEY3 463 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 KCNQ3O43525 872 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 RASSF9O75901 435 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 ZFPL1O95159 310 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 CSTBP04080 98 aaKnown RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 VEGFAP15692 232 aaPredicted RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 ACO1P21399 889 aaKnown RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 FGFR4P22455 802 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 ACVR2AP27037 513 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 TXKP42681 527 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 GRK6P43250 576 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 RNASE9P60153 205 aaKnown RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 MC2RQ01718 297 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 OCA2Q04671 838 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 PIGFQ07326 219 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 PDCD4Q53EL6 469 aaKnown RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 UBXN11Q5T124 520 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 PGBD2Q6P3X8 592 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 GLB1LQ6UWU2 654 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 KRT28Q7Z3Y7 464 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 SGMS1Q86VZ5 419 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 YAF2Q8IY57 180 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 GSPT2Q8IYD1 628 aaKnown RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 CACNA2D3Q8IZS8 1091 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 MYCT1Q8N699 235 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 SMOQ99835 787 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 ZSWIM1Q9BR11 485 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 TTYH3Q9C0H2 523 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 CD248Q9HCU0 757 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 PARD6AQ9NPB6 346 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 MAGED2Q9UNF1 606 aaPredicted RBP7.13□□□□□ -1.27
VPS50-212ENST00000476413 ATP11BQ9Y2G3 1177 aa7.13□□□□□ -1.27
VPS50-212ENST00000476413 CCDC195A0A1B0GUA6 201 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 HNRNPDLO14979 420 aaKnown RBP7.12□□□□□ -1.27
VPS50-212ENST00000476413 NPC1O15118 1278 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 SUN1O94901 812 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 CYP2C9P11712 490 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 MAN2A2P49641 1150 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 HHEXQ03014 270 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 BLMHQ13867 455 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms