RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 METTL23Q86XA0 190 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 SMYD4Q8IYR2 804 aaPredicted RBP13.7□□□□□ -0.22
GPC1-204ENST00000426280 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 HPDLQ96IR7 371 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 ZNF560Q96MR9 790 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 LRRC3BQ96PB8 259 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 MRPL45Q9BRJ2 306 aaKnown RBP13.7□□□□□ -0.22
GPC1-204ENST00000426280 PI4K2AQ9BTU6 479 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 IL21Q9HBE4 155 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 MAFFQ9ULX9 164 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 HCN4Q9Y3Q4 1203 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 LRRIQ3A6PVS8 624 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 EXOC3O60645 756 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 VNN1O95497 513 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 TNNI1P19237 187 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 PNPLA4P41247 253 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 MYL6P60660 151 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 SNRPFP62306 86 aaKnown RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 PDZD4Q76G19 769 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 TMEM150AQ86TG1 271 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 PARD3BQ8TEW8 1205 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 OXCT2Q9BYC2 517 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 CRTAC1Q9NQ79 661 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 WNT16Q9UBV4 365 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 DSEQ9UL01 958 aa13.69□□□□□ -0.22
GPC1-204ENST00000426280 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
GPC1-204ENST00000426280 ZNF318Q5VUA4 2279 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 HUS1O60921 280 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 TNNC2P02585 160 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 NR3C1P04150 777 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 PDGFRBP09619 1106 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 CYP2F1P24903 491 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 ALDH1A3P47895 512 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 PSMC1P62191 440 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 FAM160A1Q05DH4 1040 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 GRM2Q14416 872 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 SURF1Q15526 300 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 MGAT5BQ3V5L5 792 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 INTS6LQ5JSJ4 861 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 TDRD10Q5VZ19 366 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 IQCEQ6IPM2 695 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 SUGP1Q8IWZ8 645 aaKnown RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 TOP6BLQ8N6T0 577 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 NXPE3Q969Y0 559 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 ASB16Q96NS5 453 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 SDCBP2Q9H190 292 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 SLC2A4RGQ9NR83 387 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 FBXL21Q9UKT6 434 aa13.68□□□□□ -0.22
GPC1-204ENST00000426280 MTF2Q9Y483 593 aaPredicted RBP13.68□□□□□ -0.22
GPC1-204ENST00000426280 PDXKO00764 312 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 MICAL2O94851 1124 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 CD72P21854 359 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 PLA2G5P39877 138 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 EPHB3P54753 998 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 CDH8P55286 799 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 UBE2HP62256 183 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 CLDN10P78369 228 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 CYP4F8P98187 520 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 DDR2Q16832 855 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
GPC1-204ENST00000426280 FAM171BQ6P995 826 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 VITQ6UXI7 678 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 ADGRF2Q8IZF7 708 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 PSMG2Q969U7 264 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 GBP4Q96PP9 640 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 FNBP1Q96RU3 617 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 FOXQ1Q9C009 403 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 DPEP3Q9H4B8 488 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 FAM86C1Q9NVL1 165 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 TRAF3IP3Q9Y228 551 aa13.67□□□□□ -0.22
GPC1-204ENST00000426280 ZNF197O14709 1029 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 ECI2O75521 394 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 AKAP3O75969 853 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 MYL1P05976 194 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 GLULP15104 373 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
GPC1-204ENST00000426280 GABRR2P28476 465 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 RAP1GAPP47736 663 aa13.66□□□□□ -0.22
GPC1-204ENST00000426280 PMS1P54277 932 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms