RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 TXNRD2Q9NNW7 524 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 CTNNAL1Q9UBT7 734 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 POLIQ9UNA4 740 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CXCL11O14625 94 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 DNALI1O14645 258 aaPredicted RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 MED7O43513 233 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 HBP1O60381 514 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 IL18RAPO95256 599 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 VIMP08670 466 aaKnown RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 TFDP3Q5H9I0 405 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 FBXW10Q5XX13 1052 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 DENND1BQ6P3S1 775 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CCDC13Q8IYE1 715 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 ALLCQ8N6M5 410 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 ANKS4BQ8N8V4 417 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 C9orf72Q96LT7 481 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CCDC77Q9BR77 488 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CDT1Q9H211 546 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 RPF1Q9H9Y2 349 aaKnown RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 SAMD15Q9P1V8 674 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 LGALS13Q9UHV8 139 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 LRRD1A4D1F6 860 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 CD19P15391 556 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 POLR2BP30876 1174 aaKnown RBP17.77■□□□□ 0.44
NUP50-203ENST00000407019 CLCN3P51790 818 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 MBTD1Q05BQ5 628 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 STAT4Q14765 748 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 ANKRD20A8PQ5CZ79 823 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 TXNRD3NBQ6F5E7 133 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 CHADLQ6NUI6 762 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 EFCAB12Q6NXP0 572 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 VSTM1Q6UX27 236 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 PIGWQ7Z7B1 504 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 CDR2LQ86X02 465 aaPredicted RBP17.77■□□□□ 0.44
NUP50-203ENST00000407019 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 COPS5Q92905 334 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 CLMNQ96JQ2 1002 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 RBM15Q96T37 977 aaKnown RBP eCLIP17.77■□□□□ 0.44
NUP50-203ENST00000407019 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
NUP50-203ENST00000407019 LHX5Q9H2C1 402 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 TNFSF13BQ9Y275 285 aa17.77■□□□□ 0.44
NUP50-203ENST00000407019 DRG1Q9Y295 367 aaKnown RBP17.77■□□□□ 0.44
NUP50-203ENST00000407019 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 KRT19P08727 400 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 ABHD2P08910 425 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 CXCL8P10145 99 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 CDKN2BP42772 138 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 MAGEA4P43358 317 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 ARSEP51690 589 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 VCPP55072 806 aaKnown RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 ITIH4Q14624 930 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 PTPN20Q4JDL3 420 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 LACTB2Q53H82 288 aaPredicted RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 ZNF667Q5HYK9 610 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 POLNQ7Z5Q5 900 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 ACSF2Q96CM8 615 aaPredicted RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 RBPJLQ9UBG7 517 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 DICER1Q9UPY3 1922 aaKnown RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 GOLGA8SH3BPF8 625 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 CDH16O75309 829 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 ZSCAN5DPP0CG00 497 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 TXNP10599 105 aaKnown RBP17.76■□□□□ 0.43
NUP50-203ENST00000407019 PSMA2P25787 234 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 RAP1GAPP47736 663 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 Q3C1V9 767 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 GLIS1Q8NBF1 620 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 MGARPQ8TDB4 240 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 CCT6BQ92526 530 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 BCO2Q9BYV7 579 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
NUP50-203ENST00000407019 GHRP10912 638 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 CREB1P16220 341 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 LRRC14Q15048 493 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 OASLQ15646 514 aaKnown RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 ANKRD13AQ8IZ07 590 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 NKD2Q969F2 451 aaPredicted RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 HAUS1Q96CS2 278 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 ZBTB10Q96DT7 871 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 CFAP57Q96MR6 1250 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 MINDY3Q9H8M7 445 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 SIX4Q9UIU6 781 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 TPX2Q9ULW0 747 aaKnown RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 KCNH4Q9UQ05 1017 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 SIGLEC16A6NMB1 481 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 NDC80O14777 642 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 ITGAVP06756 1048 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 NFICP08651 508 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 KRT3P12035 628 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 BRAFP15056 766 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 OSBPP22059 807 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 RFC1P35251 1148 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms