RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RGS16O15492 202 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 GABBR2O75899 941 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 PFKMP08237 780 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 CXCL8P10145 99 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 EIF4BP23588 611 aaKnown RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 CDH8P55286 799 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 ORC1Q13415 861 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 PIWIL1Q96J94 861 aaKnown RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 ELOVL4Q9GZR5 314 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 MRPL47Q9HD33 250 aaKnown RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 NRBP2Q9NSY0 501 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.27■□□□□ 0.28e-9■■■■■ 27.8
CPSF7-202ENST00000394888 SAE1Q9UBE0 346 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 IP6K2Q9UHH9 426 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 TLDC2A0PJX2 215 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 FAM228AQ86W67 206 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 XYLT1Q86Y38 959 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 IPO4Q8TEX9 1081 aaKnown RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 PEBP4Q96S96 227 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 SLC12A4Q9UP95 1085 aa16.27■□□□□ 0.2
CPSF7-202ENST00000394888 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-202ENST00000394888 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 ERLIN2O94905 339 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 FGFR1P11362 822 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 ARSEP51690 589 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 CLCN3P51790 818 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 MGAT5Q09328 741 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 MAP1SQ66K74 1059 aaPredicted RBP16.27■□□□□ 0.19
CPSF7-202ENST00000394888 CCDC25Q86WR0 208 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 AGGF1Q8N302 714 aaeCLIP16.27■□□□□ 0.19
CPSF7-202ENST00000394888 NKD2Q969F2 451 aaPredicted RBP16.27■□□□□ 0.19
CPSF7-202ENST00000394888 SMYD3Q9H7B4 428 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.19
CPSF7-202ENST00000394888 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 CSDE1O75534 798 aaKnown RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 GABRB2P47870 512 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 AP3M2P53677 418 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 MSS51Q4VC12 460 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 IZUMO3Q5VZ72 239 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 LHX5Q9H2C1 402 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 ASIC3Q9UHC3 531 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 DNALI1O14645 258 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 VPS41P49754 854 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 P3H1Q32P28 736 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 SCARA5Q6ZMJ2 495 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 MZB1Q8WU39 189 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 CLUHO75153 1309 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 BANF1O75531 89 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 GPX6P59796 221 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 MXD4Q14582 209 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 FAM187BQ17R55 369 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 EAPPQ56P03 285 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-202ENST00000394888 MARCH8Q5T0T0 291 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 RHPN2Q8IUC4 686 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 DENND1AQ8TEH3 1009 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
CPSF7-202ENST00000394888 HNRNPH1P31943 449 aaKnown RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ODF2Q5BJF6 829 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ATF7IP2Q5U623 682 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 RCOR2Q8IZ40 523 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 PRCCQ92733 491 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ANAPC5Q9UJX4 755 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 NAALADL1Q9UQQ1 740 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 TNFSF13BQ9Y275 285 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 TMEM120BA0PK00 339 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ENDOD1O94919 500 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ATF2P15336 505 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 LIN9Q5TKA1 542 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ANKRD22Q5VYY1 191 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ADAM33Q9BZ11 813 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ZNF518BQ9C0D4 1074 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 VRTNQ9H8Y1 702 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 DRG1Q9Y295 367 aaKnown RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ADCY6O43306 1168 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 C1QAP02745 245 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 PECAM1P16284 738 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 NRLP54845 237 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 SH3PXD2AQ5TCZ1 1133 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ZNF276Q8N554 614 aa16.25■□□□□ 0.19
CPSF7-202ENST00000394888 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-202ENST00000394888 TCRBV7S3A2A0A539 114 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 ITGAVP06756 1048 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 ABHD2P08910 425 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 FOXN2P32314 431 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms