RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
APP-202ENST00000348990 TXNDC9O14530 226 aa18.74■□□□□ 0.59
APP-202ENST00000348990 ABLIM1O14639 778 aa18.74■□□□□ 0.59
APP-202ENST00000348990 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
APP-202ENST00000348990 PSTPIP1O43586 416 aa18.74■□□□□ 0.59
APP-202ENST00000348990 RTN3O95197 1032 aaPredicted RBP18.74■□□□□ 0.59
APP-202ENST00000348990 ADSSP30520 456 aa18.74■□□□□ 0.59
APP-202ENST00000348990 C1orf146Q5VVC0 180 aa18.74■□□□□ 0.59
APP-202ENST00000348990 ATP11CQ8NB49 1132 aa18.74■□□□□ 0.59
APP-202ENST00000348990 ZNF184Q99676 751 aaPredicted RBP18.74■□□□□ 0.59
APP-202ENST00000348990 ZWILCHQ9H900 591 aa18.74■□□□□ 0.59
APP-202ENST00000348990 EURLQ9NYK6 297 aa18.74■□□□□ 0.59
APP-202ENST00000348990 MRPL11Q9Y3B7 192 aaKnown RBP18.74■□□□□ 0.59
APP-202ENST00000348990 TYROBPO43914 113 aa18.73■□□□□ 0.59
APP-202ENST00000348990 GNA15P30679 374 aa18.73■□□□□ 0.59
APP-202ENST00000348990 DSG3P32926 999 aa18.73■□□□□ 0.59
APP-202ENST00000348990 NEK3P51956 506 aa18.73■□□□□ 0.59
APP-202ENST00000348990 ALYREFQ86V81 257 aaKnown RBP18.73■□□□□ 0.59
APP-202ENST00000348990 FBXO36Q8NEA4 188 aa18.73■□□□□ 0.59
APP-202ENST00000348990 CCDC110Q8TBZ0 833 aa18.73■□□□□ 0.59
APP-202ENST00000348990 TDRD3Q9H7E2 651 aaKnown RBP18.73■□□□□ 0.59
APP-202ENST00000348990 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
APP-202ENST00000348990 TBX20Q9UMR3 447 aa18.73■□□□□ 0.59
APP-202ENST00000348990 KAT6AQ92794 2004 aa18.73■□□□□ 0.59
APP-202ENST00000348990 INHBAP08476 426 aa18.73■□□□□ 0.59
APP-202ENST00000348990 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
APP-202ENST00000348990 GPC3P51654 580 aa18.73■□□□□ 0.59
APP-202ENST00000348990 ARL4CP56559 192 aa18.73■□□□□ 0.59
APP-202ENST00000348990 RASA2Q15283 850 aa18.73■□□□□ 0.59
APP-202ENST00000348990 SMTNL2Q2TAL5 461 aa18.73■□□□□ 0.59
APP-202ENST00000348990 SMC1BQ8NDV3 1235 aa18.73■□□□□ 0.59
APP-202ENST00000348990 SLC24A2Q9UI40 661 aa18.73■□□□□ 0.59
APP-202ENST00000348990 ANGPTL2Q9UKU9 493 aa18.73■□□□□ 0.59
APP-202ENST00000348990 UNGP13051 313 aaPredicted RBP18.73■□□□□ 0.59
APP-202ENST00000348990 ETS2P15036 469 aa18.73■□□□□ 0.59
APP-202ENST00000348990 GLRA2P23416 452 aa18.73■□□□□ 0.59
APP-202ENST00000348990 JAG1P78504 1218 aa18.73■□□□□ 0.59
APP-202ENST00000348990 MAMLD1Q13495 774 aa18.73■□□□□ 0.59
APP-202ENST00000348990 RBM41Q96IZ5 413 aaKnown RBP18.73■□□□□ 0.59
APP-202ENST00000348990 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
APP-202ENST00000348990 RANBP17Q9H2T7 1088 aaKnown RBP18.73■□□□□ 0.59
APP-202ENST00000348990 AVENQ9NQS1 362 aaPredicted RBP18.73■□□□□ 0.59
APP-202ENST00000348990 I3L4J1 428 aa18.72■□□□□ 0.59
APP-202ENST00000348990 GSTT1P30711 240 aa18.72■□□□□ 0.59
APP-202ENST00000348990 BPIFB4P59827 614 aa18.72■□□□□ 0.59
APP-202ENST00000348990 IRX4P78413 519 aa18.72■□□□□ 0.59
APP-202ENST00000348990 MORF4L2Q15014 288 aa18.72■□□□□ 0.59
APP-202ENST00000348990 AOC3Q16853 763 aa18.72■□□□□ 0.59
APP-202ENST00000348990 OR52E8Q6IFG1 317 aa18.72■□□□□ 0.59
APP-202ENST00000348990 GMCL1Q96IK5 515 aa18.72■□□□□ 0.59
APP-202ENST00000348990 MCEEQ96PE7 176 aa18.72■□□□□ 0.59
APP-202ENST00000348990 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
APP-202ENST00000348990 LNPEPQ9UIQ6 1025 aa18.72■□□□□ 0.59
APP-202ENST00000348990 MTO1Q9Y2Z2 717 aaKnown RBP18.72■□□□□ 0.59
APP-202ENST00000348990 F8VP50 259 aa18.72■□□□□ 0.59
APP-202ENST00000348990 ALOX15BO15296 676 aa18.72■□□□□ 0.59
APP-202ENST00000348990 USP1O94782 785 aa18.72■□□□□ 0.59
APP-202ENST00000348990 GSTA2P09210 222 aa18.72■□□□□ 0.59
APP-202ENST00000348990 KATNAL2Q8IYT4 538 aa18.72■□□□□ 0.59
APP-202ENST00000348990 B4GALNT2Q8NHY0 566 aa18.72■□□□□ 0.59
APP-202ENST00000348990 SLC13A1Q9BZW2 595 aa18.72■□□□□ 0.59
APP-202ENST00000348990 NMUR2Q9GZQ4 415 aa18.72■□□□□ 0.59
APP-202ENST00000348990 NDE1Q9NXR1 346 aa18.72■□□□□ 0.59
APP-202ENST00000348990 SMCHD1A6NHR9 2005 aa18.72■□□□□ 0.59
APP-202ENST00000348990 TRAFD1O14545 582 aaPredicted RBP18.72■□□□□ 0.59
APP-202ENST00000348990 ITGB5P18084 799 aa18.72■□□□□ 0.59
APP-202ENST00000348990 ALDH18A1P54886 795 aaKnown RBP18.72■□□□□ 0.59
APP-202ENST00000348990 TMPRSS15P98073 1019 aa18.72■□□□□ 0.59
APP-202ENST00000348990 CDK16Q00536 496 aa18.72■□□□□ 0.59
APP-202ENST00000348990 RCOR2Q8IZ40 523 aa18.72■□□□□ 0.59
APP-202ENST00000348990 PDIK1LQ8N165 341 aa18.72■□□□□ 0.59
APP-202ENST00000348990 OGFOD1Q8N543 542 aa18.72■□□□□ 0.59
APP-202ENST00000348990 LAMB2P55268 1798 aa18.71■□□□□ 0.59
APP-202ENST00000348990 ACOT2P49753 483 aa18.71■□□□□ 0.59
APP-202ENST00000348990 OCRLQ01968 901 aa18.71■□□□□ 0.59
APP-202ENST00000348990 MTMR2Q13614 643 aa18.71■□□□□ 0.59
APP-202ENST00000348990 LRRC23Q53EV4 343 aaPredicted RBP18.71■□□□□ 0.59
APP-202ENST00000348990 ANKRD22Q5VYY1 191 aa18.71■□□□□ 0.59
APP-202ENST00000348990 RGS9BPQ6ZS82 235 aa18.71■□□□□ 0.59
APP-202ENST00000348990 SENP7Q9BQF6 1050 aa18.71■□□□□ 0.59
APP-202ENST00000348990 MXRA8Q9BRK3 442 aa18.71■□□□□ 0.59
APP-202ENST00000348990 STRA6Q9BX79 667 aa18.71■□□□□ 0.59
APP-202ENST00000348990 KANSL3Q9P2N6 904 aa18.71■□□□□ 0.59
APP-202ENST00000348990 ASB3Q9Y575 518 aa18.71■□□□□ 0.59
APP-202ENST00000348990 MYPNQ86TC9 1320 aa18.71■□□□□ 0.59
APP-202ENST00000348990 PYGBP11216 843 aa18.71■□□□□ 0.59
APP-202ENST00000348990 NPTX2P47972 431 aa18.71■□□□□ 0.59
APP-202ENST00000348990 GPX6P59796 221 aa18.71■□□□□ 0.59
APP-202ENST00000348990 GTF2BQ00403 316 aa18.71■□□□□ 0.59
APP-202ENST00000348990 AP1B1Q10567 949 aa18.71■□□□□ 0.59
APP-202ENST00000348990 PTK7Q13308 1070 aa18.71■□□□□ 0.59
APP-202ENST00000348990 KCNT1Q5JUK3 1230 aa18.71■□□□□ 0.59
APP-202ENST00000348990 TDRPQ86YL5 185 aa18.71■□□□□ 0.59
APP-202ENST00000348990 ARID3BQ8IVW6 561 aaPredicted RBP18.71■□□□□ 0.59
APP-202ENST00000348990 ALLCQ8N6M5 410 aa18.71■□□□□ 0.59
APP-202ENST00000348990 PPP1R14CQ8TAE6 165 aa18.71■□□□□ 0.59
APP-202ENST00000348990 FEZF2Q8TBJ5 459 aa18.71■□□□□ 0.59
APP-202ENST00000348990 SH3TC2Q8TF17 1288 aa18.71■□□□□ 0.59
APP-202ENST00000348990 FAM136AQ96C01 138 aa18.71■□□□□ 0.59
APP-202ENST00000348990 OXNAD1Q96HP4 312 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms