RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 RGL2O15211 777 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 CYP2C8P10632 490 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 AUHQ13825 339 aaKnown RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 ARHGEF19Q8IW93 802 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 ALG3Q92685 438 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 GANQ9H2C0 597 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 DCLRE1BQ9H816 532 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 WHRNQ9P202 907 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 IQCA1LA6NCM1 817 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 ZNF568Q3ZCX4 644 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 RYBPQ8N488 228 aaPredicted RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 OR6B3Q8NGW1 331 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 PAPOLBQ9NRJ5 636 aaKnown RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 EML1O00423 815 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 VIL1P09327 827 aaKnown RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 RPS12P25398 132 aaKnown RBP17.2■□□□□ 0.34
SFXN1-201ENST00000321442 EPHX2P34913 555 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 PPATQ06203 517 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 PCNX4Q63HM2 1172 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 CATSPER4Q7RTX7 472 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 EFHD1Q9BUP0 239 aa17.2■□□□□ 0.34
SFXN1-201ENST00000321442 SLIT2O94813 1529 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 O00370 1275 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 GZMAP12544 262 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 ATP6V1B1P15313 513 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 SDC4P31431 198 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 OCRLQ01968 901 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 CNGA2Q16280 664 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 SH3BP5LQ7L8J4 393 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 TEX9Q8N6V9 391 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 PRELID2Q8N945 189 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 TTYH3Q9C0H2 523 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 MRPL46Q9H2W6 279 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 FNDC3AQ9Y2H6 1198 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 PPP1R12AO14974 1030 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 DNAJC8O75937 253 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 ICAM1P05362 532 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 GEMIN4P57678 1058 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 PHEXP78562 749 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 ECM1Q16610 540 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 TEX2Q8IWB9 1127 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 KLHL8Q9P2G9 620 aaPredicted RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 NUB1Q9Y5A7 615 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 MYL2P10916 166 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 GTF2H1P32780 548 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 CXorf38Q8TB03 319 aa17.19■□□□□ 0.34
SFXN1-201ENST00000321442 ALKBH8Q96BT7 664 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 TARS2Q9BW92 718 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
SFXN1-201ENST00000321442 FOXO6A8MYZ6 492 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 HNRNPCL1O60812 293 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 PRKCEQ02156 737 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 TFDP1Q14186 410 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CHI3L2Q15782 390 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 PKN2Q16513 984 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 PRUNE1Q86TP1 453 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 ANKRD13AQ8IZ07 590 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 LNX1Q8TBB1 728 aaPredicted RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 EXT2Q93063 718 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 AGAP3Q96P47 875 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 MTO1Q9Y2Z2 717 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 ADCY3O60266 1144 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 STX1BP61266 288 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 DEUP1Q05D60 604 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CNGA3Q16281 694 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 TAF12Q16514 161 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 DUOXA2Q1HG44 320 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 TKFCQ3LXA3 575 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 FSCBQ5H9T9 825 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 C1orf131Q8NDD1 294 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 PSPC1Q8WXF1 523 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 TRPV6Q9H1D0 765 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 SLCO1B3Q9NPD5 702 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 ZNF711Q9Y462 761 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 GTPBP10A4D1E9 387 aaKnown RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CES2O00748 559 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 TCN1P20061 433 aaPredicted RBP17.18■□□□□ 0.34
SFXN1-201ENST00000321442 SSTR1P30872 391 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 SFNP31947 248 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 RGS7P49802 495 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 IL1RL1Q01638 556 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CENPCQ03188 943 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 GABPAQ06546 454 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 NPY5RQ15761 445 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 GPAT2Q6NUI2 795 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 SV2AQ7L0J3 742 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 GALNT4Q8N4A0 578 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms