RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZBTB39O15060 712 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ANPEPP15144 967 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ACAD10Q6JQN1 1059 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 SYCP3Q8IZU3 236 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 TMEM120AQ9BXJ8 343 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 IL1RAPL1Q9NZN1 696 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 SLC24A2Q9UI40 661 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 TBC1D12O60347 775 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ETS2P15036 469 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 CYP11B1P15538 503 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 RASA2Q15283 850 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 CCDC142Q17RM4 750 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 GSTA5Q7RTV2 222 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ARHGAP24Q8N264 748 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 KCNK13Q9HB14 408 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 PGAP2Q9UHJ9 254 aa18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 MTO1Q9Y2Z2 717 aaKnown RBP18.62■□□□□ 0.57
CDKN1B-201ENST00000228872 ZBED4O75132 1171 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 GDF11O95390 407 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SPATA31D3P0C874 917 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 FDX1P10109 184 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SLC1A1P43005 524 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 MYBPC3Q14896 1274 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 ODR4Q5SWX8 454 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SYDE2Q5VT97 1194 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SPATA31D4Q6ZUB0 917 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 LCA5Q86VQ0 697 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 FAM161BQ96MY7 647 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 PCIF1Q9H4Z3 704 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 ARHGEF4Q9NR80 690 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 F8W8V4 182 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 DNALI1O14645 258 aaPredicted RBP18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 BMP3P12645 472 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SEPT7Q16181 437 aaKnown RBP18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 MARK2Q7KZI7 788 aaKnown RBP18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 SHC3Q92529 594 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 OLFM3Q96PB7 478 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 HSD17B14Q9BPX1 270 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 MANSC1Q9H8J5 431 aa18.61■□□□□ 0.57
CDKN1B-201ENST00000228872 IMPDH2P12268 514 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 MYBPC2Q14324 1141 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 TTC7BQ86TV6 843 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 LRRC6Q86X45 466 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 PPM1KQ8N3J5 372 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 KCTD17Q8N5Z5 321 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 TSSK1BQ9BXA7 367 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 C12orf65Q9H3J6 166 aaKnown RBP18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 PPCSQ9HAB8 311 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 PREBQ9HCU5 417 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 MAGEC1O60732 1142 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 CRABP2P29373 138 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 SREBF1P36956 1147 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 GMPSP49915 693 aaPredicted RBP18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 SLFN13Q68D06 897 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 GLIS1Q8NBF1 620 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 CYP2W1Q8TAV3 490 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 TCP10LQ8TDR4 215 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 DCAF4Q8WV16 495 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 SYNPO2Q9UMS6 1093 aa18.6■□□□□ 0.57
CDKN1B-201ENST00000228872 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 SLITRK3O94933 977 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 CDC16Q13042 620 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 DPY19L2Q6NUT2 758 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 SIAH1Q8IUQ4 282 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 RBM12BQ8IXT5 1001 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 ST13P4Q8IZP2 240 aaPredicted RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 PLEKHO2Q8TD55 490 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 PHACTR1Q9C0D0 580 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 VPS11Q9H270 941 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 DNAAF2Q9NVR5 837 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 SLC17A7Q9P2U7 560 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 TISP43B9A030 160 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 FCHO1O14526 889 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 CPA2P48052 419 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 MAP3K10Q02779 954 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 EFHC2Q5JST6 749 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 SLC30A10Q6XR72 485 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 MYLK4Q86YV6 388 aaPredicted RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 DDX1Q92499 740 aaKnown RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 PPP2R3CQ969Q6 453 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 STRA6Q9BX79 667 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 FHDC1Q9C0D6 1143 aaPredicted RBP18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 TMEM117Q9H0C3 514 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 TUFT1Q9NNX1 390 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 NDE1Q9NXR1 346 aa18.59■□□□□ 0.57
CDKN1B-201ENST00000228872 ALOX15BO15296 676 aa18.58■□□□□ 0.57
CDKN1B-201ENST00000228872 GRIN3BO60391 1043 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms