RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GBP3Q9H0R5 595 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 OSER1Q9NX31 292 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 SIX4Q9UIU6 781 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 HBS1LQ9Y450 684 aaKnown RBP6.99□□□□□ -1.29
RTTN-215ENST00000639487 TNRC18O15417 2968 aaPredicted RBP6.99□□□□□ -1.29
RTTN-215ENST00000639487 LGALS16A8MUM7 142 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 PPFIA3O75145 1194 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 ZMYND10O75800 440 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 HNRNPLP14866 589 aaKnown RBP eCLIP6.99□□□□□ -1.294e-8■■■■■ 39
RTTN-215ENST00000639487 BMP6P22004 513 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 PTPN9P43378 593 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 ALDH7A1P49419 539 aaKnown RBP6.99□□□□□ -1.29
RTTN-215ENST00000639487 CHST9Q7L1S5 443 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 MICAL1Q8TDZ2 1067 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 SLC35C1Q96A29 364 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 MED15Q96RN5 788 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 TSPYL1Q9H0U9 437 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 GRPEL1Q9HAV7 217 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 WDR35Q9P2L0 1181 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 FEZ2Q9UHY8 353 aaPredicted RBP6.99□□□□□ -1.29
RTTN-215ENST00000639487 PLAGL2Q9UPG8 496 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 PPIL1Q9Y3C6 166 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 NR2E1Q9Y466 385 aa6.99□□□□□ -1.29
RTTN-215ENST00000639487 DYNC1LI2O43237 492 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 VNN1O95497 513 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 EN2P19622 333 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 CALRP27797 417 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 SYKP43405 635 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 GTF2A1P52655 376 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 SNX16P57768 344 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 RBP5P82980 135 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 PRPF4BQ13523 1007 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 VWA3BQ502W6 1294 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 MTSS1LQ765P7 747 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 STRADAQ7RTN6 431 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 TRAPPC11Q7Z392 1133 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 TSC1Q92574 1164 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 PSMG2Q969U7 264 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 SPATA32Q96LK8 384 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ZNF558Q96NG5 402 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 AIFM3Q96NN9 605 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 PANX2Q96RD6 677 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 UPF3BQ9BZI7 483 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 ISCUQ9H1K1 167 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ARHGEF38Q9NXL2 777 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 HCN4Q9Y3Q4 1203 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 TMEM131Q92545 1883 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 XPO1O14980 1071 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 COQ9O75208 318 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 P4HA1P13674 534 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 FCARP24071 287 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ARSEP51690 589 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 USH1GQ495M9 461 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 PPP1R26Q5T8A7 1209 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 NSMFQ6X4W1 530 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 GLYCTKQ8IVS8 523 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 PPP1R2P1Q96PQ5 205 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 KLHL5Q96PQ7 755 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 IFIH1Q9BYX4 1025 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 CDC42EP4Q9H3Q1 356 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 KMT5AQ9NQR1 393 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ANO10Q9NW15 660 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 MSRAQ9UJ68 235 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ARL5CA6NH57 179 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 MYL3P08590 195 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ODC1P11926 461 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 TRIP4Q15650 581 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 LETM2Q2VYF4 491 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 GALNT7Q86SF2 657 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 DHX40Q8IX18 779 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 CEP57L1Q8IYX8 460 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 EHBP1Q8NDI1 1231 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 SH3TC2Q8TF17 1288 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 WHAMMQ8TF30 809 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 DIS3LQ8TF46 1054 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 SLCO2A1Q92959 643 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 CEP170P1Q96L14 293 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 FAM210AQ96ND0 272 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.98□□□□□ -1.29
RTTN-215ENST00000639487 AGO3Q9H9G7 860 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 TMEM39AQ9NV64 488 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 ZNHIT6Q9NWK9 470 aaKnown RBP6.98□□□□□ -1.29
RTTN-215ENST00000639487 DONSONQ9NYP3 566 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 NEU3Q9UQ49 428 aa6.98□□□□□ -1.29
RTTN-215ENST00000639487 FAM205CA6NFA0 338 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 EVI5O60447 810 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 RPS6KA5O75582 802 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 NAT1P18440 290 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 CNR2P34972 360 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 STAT6P42226 847 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 NAP1L1P55209 391 aaKnown RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 ASIC1P78348 528 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 CENPCQ03188 943 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 CNGA2Q16280 664 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 NFE2Q16621 373 aaPredicted RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 SLFN11Q7Z7L1 901 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms