RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 FITM2Q8N6M3 262 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 GLIS1Q8NBF1 620 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 DNERQ8NFT8 737 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 ZFP28Q8NHY6 868 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 IPCEF1Q8WWN9 437 aaPredicted RBP8.75□□□□□ -1.01
NUP54-215ENST00000514313 RAPGEF4Q8WZA2 1011 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 SPATA5L1Q9BVQ7 753 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 IMPG2Q9BZV3 1241 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 RGS17Q9UGC6 210 aaPredicted RBP8.75□□□□□ -1.01
NUP54-215ENST00000514313 TBC1D30Q9Y2I9 924 aa8.75□□□□□ -1.01
NUP54-215ENST00000514313 TRIM38O00635 465 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 CHEK2O96017 543 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 HSD3B1P14060 373 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 GABRB3P28472 473 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 ITGA8P53708 1063 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 SPARCL1Q14515 664 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 POSTNQ15063 836 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 RAB30Q15771 203 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 FKBP15Q5T1M5 1219 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 CCDC70Q6NSX1 233 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 PPP1R32Q7Z5V6 425 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 PDPRQ8NCN5 879 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 MAGEB5Q9BZ81 275 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 CPEB1Q9BZB8 566 aaKnown RBP8.74□□□□□ -1.01
NUP54-215ENST00000514313 IGSF9Q9P2J2 1179 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
NUP54-215ENST00000514313 PRR5-ARHGAP8B1AHC4 643 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 PRSS23O95084 383 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 A1BGP04217 495 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 CR2P20023 1033 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 SERPINF1P36955 418 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 SLURP1P55000 103 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 PRKG1Q13976 671 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 LVRNQ6Q4G3 990 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 FAM124AQ86V42 546 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 YAF2Q8IY57 180 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 TMEM176AQ96HP8 235 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 LRRC37BQ96QE4 947 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 CPPED1Q9BRF8 314 aaPredicted RBP8.73□□□□□ -1.01
NUP54-215ENST00000514313 SORBS1Q9BX66 1292 aaKnown RBP8.73□□□□□ -1.01
NUP54-215ENST00000514313 TLR10Q9BXR5 811 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 RGL1Q9NZL6 768 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 HESX1Q9UBX0 185 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 HDAC5Q9UQL6 1122 aa8.73□□□□□ -1.01
NUP54-215ENST00000514313 ACVR2AP27037 513 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 MAPK9P45984 424 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 TCF15Q12870 199 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 FAM160B1Q5W0V3 765 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 FAM83AQ86UY5 434 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 Q8N3U1 123 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 STYXQ8WUJ0 223 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 CNPPD1Q9BV87 410 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 PLA2G12BQ9BX93 195 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP54-215ENST00000514313 SIK2Q9H0K1 926 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 MSL2Q9HCI7 577 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 RRN3Q9NYV6 651 aa8.72□□□□□ -1.01
NUP54-215ENST00000514313 RAB27BO00194 218 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 TNFRSF6BO95407 300 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 DHRS4L1P0CG22 281 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 BTF3P20290 206 aaKnown RBP8.71□□□□□ -1.02
NUP54-215ENST00000514313 FDXRP22570 491 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 SLFN5Q08AF3 891 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 KIAA2012Q0VF49 1180 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 FOXO1Q12778 655 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 KCNA10Q16322 511 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 AMOTQ4VCS5 1084 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 NOMO2Q5JPE7 1267 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 MFSD5Q6N075 450 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 EFCAB12Q6NXP0 572 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 JMJD6Q6NYC1 403 aaPredicted RBP8.71□□□□□ -1.02
NUP54-215ENST00000514313 MMS22LQ6ZRQ5 1243 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 SUGP1Q8IWZ8 645 aaKnown RBP8.71□□□□□ -1.02
NUP54-215ENST00000514313 FAM71BQ8TC56 605 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 LMF1Q96S06 567 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 PAGR1Q9BTK6 254 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 NELFAQ9H3P2 528 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 HEYLQ9NQ87 328 aaPredicted RBP8.71□□□□□ -1.02
NUP54-215ENST00000514313 NECTIN3Q9NQS3 549 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 ITM2CQ9NQX7 267 aa8.71□□□□□ -1.02
NUP54-215ENST00000514313 PIP5K1BO14986 540 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 NOBOXO60393 691 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 FARP2O94887 1054 aaPredicted RBP8.7□□□□□ -1.02
NUP54-215ENST00000514313 TSPAN15O95858 294 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 AGR2O95994 175 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 SRGNP10124 158 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 FCER1AP12319 257 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 GNAT2P19087 354 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 VIPR2P41587 438 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 COPAP53621 1224 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 WNT3P56703 355 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 PTK2BQ14289 1009 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 ARHGAP15Q53QZ3 475 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 LIN54Q6MZP7 749 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 USP49Q70CQ1 688 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 MED25Q71SY5 747 aa8.7□□□□□ -1.02
NUP54-215ENST00000514313 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms