RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PSMD3O43242 534 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 MAPK7Q13164 816 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 VEPH1Q14D04 833 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 RNF219Q5W0B1 726 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 C3orf62Q6ZUJ4 267 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 ADAM33Q9BZ11 813 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 CELF2O95319 508 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 PCNX4Q63HM2 1172 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 MED15Q96RN5 788 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 ZSWIM1Q9BR11 485 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 RUSC1Q9BVN2 902 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 SNRPAP09012 282 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 VCAM1P19320 739 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 CAPRIN1Q14444 709 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 KCNK16Q96T55 309 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 HACD3Q9P035 362 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 C3orf70A6NLC5 250 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 ATMINO43313 823 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KLC1Q07866 573 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 LRRC8EQ6NSJ5 796 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 LRRC71Q8N4P6 559 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KRT35Q92764 455 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 ATXN7L3BQ96GX2 97 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 TARS2Q9BW92 718 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 AP5Z1O43299 807 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 CSPG5O95196 566 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KLHL2O95198 593 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 RARBP10826 455 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KRT4P19013 534 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 PON1P27169 355 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 C16orf87Q6PH81 154 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 PPHLN1Q8NEY8 458 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 AGR3Q8TD06 166 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 EHD2Q9NZN4 543 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 CHMP2BQ9UQN3 213 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 CAPN6Q9Y6Q1 641 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 EIF4E1BA6NMX2 242 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KBTBD13C9JR72 458 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 IFNA8P32881 189 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 SULT1E1P49888 294 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 NBPF20Q3BBV1 942 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 GJB7Q6PEY0 223 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 CLMNQ96JQ2 1002 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 THAP2Q9H0W7 228 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 MOCS2O96007 188 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 MED21Q13503 144 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 DDIASQ8IXT1 998 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 DTX3LQ8TDB6 740 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC40A1Q9NP59 571 aa16.91■□□□□ 0.3
HMGXB3-202ENST00000503427 WEE2P0C1S8 567 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SPATA2LQ8IUW3 424 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ASAP3Q8TDY4 903 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 FRMD8Q9BZ67 464 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 IL17RBQ9NRM6 502 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 MRGBPQ9NV56 204 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SV2CQ496J9 727 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SARS2Q9NP81 518 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 CST8O60676 142 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 PPIL6Q8IXY8 311 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 TEX9Q8N6V9 391 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 PBXIP1Q96AQ6 731 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ASPSCR1Q9BZE9 553 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 LMCD1Q9NZU5 365 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ARP10275 920 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 RBP3P10745 1247 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 ITGA4P13612 1032 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 DFFAO00273 331 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 HADHAP40939 763 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 SYNPO2Q9UMS6 1093 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 DUSP10Q9Y6W6 482 aa16.9■□□□□ 0.3
HMGXB3-202ENST00000503427 UBA6A0AVT1 1052 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 NAMPTP43490 491 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 HERVK_113P62684 666 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 CNGA3Q16281 694 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 PCMTD2Q9NV79 361 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 TMCC1O94876 653 aa16.89■□□□□ 0.29
HMGXB3-202ENST00000503427 CTSHP09668 335 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms