RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MYLKQ15746 1914 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 PLXND1Q9Y4D7 1925 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 MYO16Q9Y6X6 1858 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 A0A087X0B3 334 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 IPO5O00410 1097 aaKnown RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 MEIS2O14770 477 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 NDUFS2O75306 463 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 KLF8O95600 359 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 C1SP09871 688 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 FGFR3P22607 806 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 AKAP5P24588 427 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 TKTP29401 623 aaKnown RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 HOXA11P31270 313 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 GABREP78334 506 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 CDC42EP1Q00587 391 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 SGO2Q562F6 1265 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 SLC8B1Q6J4K2 584 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 ANKS3Q6ZW76 656 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 ZNF410Q86VK4 478 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 RHPN2Q8IUC4 686 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 KSR1Q8IVT5 923 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 LSMEM2Q8N112 164 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 KIF1BPQ96EK5 621 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 LRRC3Q9BY71 257 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 AGO4Q9HCK5 861 aaKnown RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 ZDHHC4Q9NPG8 344 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 THSD1Q9NS62 852 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 KLK14Q9P0G3 267 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 CALCOCO1Q9P1Z2 691 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 ITGB1BP2Q9UKP3 347 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 GIT1Q9Y2X7 761 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
HDAC3-206ENST00000471968 MAFBQ9Y5Q3 323 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-206ENST00000471968 FN1P02751 2386 aaKnown RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 TDRD15B5MCY1 1934 aaKnown RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 KNL1Q8NG31 2342 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 A0A1B0GVT2 93 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 MEI4A8MW99 385 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 KCNK3O14649 394 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 CLDN1O95832 211 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 TIE1P35590 1138 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 ACADVLP49748 655 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 IL9RQ01113 521 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 TUSC3Q13454 348 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 NAA30Q147X3 362 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 SLC35G1Q2M3R5 365 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 EML3Q32P44 896 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 INAVAQ3KP66 663 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 ARHGAP15Q53QZ3 475 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 HSP90AB4PQ58FF6 505 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 CPA6Q8N4T0 437 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 DCBLD1Q8N8Z6 715 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 IL17RCQ8NAC3 791 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 PIBF1Q8WXW3 757 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 ARHGAP45Q92619 1136 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 FOXJ1Q92949 421 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 MIB2Q96AX9 1013 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 CNDP2Q96KP4 475 aaKnown RBP7.33□□□□□ -1.24
HDAC3-206ENST00000471968 MXRA8Q9BRK3 442 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 ECT2Q9H8V3 914 aa7.33□□□□□ -1.24
HDAC3-206ENST00000471968 PNMA6FA0A0J9YX94 578 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 I3L4J1 428 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 BCAT2O15382 392 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 EFSO43281 561 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 PCDHGA12O60330 932 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 DXOO77932 396 aaKnown RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 LDOC1O95751 146 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 PRF1P14222 555 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 TRIM27P14373 513 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 GABRG2P18507 467 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 UQCRFS1P47985 274 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 CCT8P50990 548 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 MRPS21P82921 87 aaKnown RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 CYP4F8P98187 520 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 CYP4A11Q02928 519 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 KIF19Q2TAC6 998 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 EOGTQ5NDL2 527 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 CCNL2Q96S94 520 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 MMS19Q96T76 1030 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 KDM4CQ9H3R0 1056 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 NXF3Q9H4D5 531 aaKnown RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 ASCL3Q9NQ33 180 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 GEMIN8Q9NWZ8 242 aaKnown RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 SUCLA2Q9P2R7 463 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-206ENST00000471968 GABBR1Q9UBS5 961 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 MAD2L2Q9UI95 211 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 CCL26Q9Y258 94 aa7.32□□□□□ -1.24
HDAC3-206ENST00000471968 RP1L1Q8IWN7 2480 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms